Difference between revisions of "SPMDt3"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GLCNt2ir GLCNt2ir] == * direction: ** REVERSIBLE * common name: ** D gluconate transport via proton...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/SPMDt3 SPMDt3] == * direction: ** LEFT-TO-RIGHT * common name: ** Spermidine transport out via prot...")
 
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/GLCNt2ir GLCNt2ir] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/SPMDt3 SPMDt3] ==
 
* direction:
 
* direction:
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** D gluconate transport via proton symport
+
** Spermidine transport out via proton antiport
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[glcn__D]][e] '''+''' 1.0 [[h]][e] '''<=>''' 1.0 [[glcn__D]][c] '''+''' 1.0 [[h]][c]
+
** 1.0 [[h]][e] '''+''' 1.0 [[spmd]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[spmd]][e]
 
* With common name(s):
 
* With common name(s):
** 1.0 D Gluconate C6H11O7[e] '''+''' 1.0 H+[e] '''<=>''' 1.0 D Gluconate C6H11O7[c] '''+''' 1.0 H+[c]
+
** 1.0 H+[e] '''+''' 1.0 Spermidine[c] '''=>''' 1.0 H+[c] '''+''' 1.0 Spermidine[e]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF2647]]
+
* Gene: [[EF1078]]
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
Line 22: Line 22:
 
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-curation_from_orthology]]
 
== External links  ==
 
== External links  ==
* RHEA:
+
{{#set: direction=LEFT-TO-RIGHT}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28831 28831]
+
{{#set: common name=Spermidine transport out via proton antiport}}
* MetaNetX (MNX) Equation : MNXR100209
+
{{#set: gene associated=EF1078}}
* BioCyc : META:TRANS-RXN0-209
+
{{#set: direction=REVERSIBLE}}
+
{{#set: common name=D gluconate transport via proton symport}}
+
{{#set: gene associated=EF2647}}
+
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=orthology|manual}}
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168}}
+
{{#set: reconstruction source=manual-curation_from_orthology|orthology-b_subtilis_subsp_subtilis_str168}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:46, 21 March 2018

Reaction SPMDt3

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Spermidine transport out via proton antiport
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H+[e] + 1.0 Spermidine[c] => 1.0 H+[c] + 1.0 Spermidine[e]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links