Difference between revisions of "HMPK1"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ALATA_L2 ALATA_L2] == * direction: ** LEFT-TO-RIGHT * common name: ** Alanine transaminase * Synony...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/HMPK1 HMPK1] == * direction: ** LEFT-TO-RIGHT * common name: ** Hydroxymethylpyrimidine kinase (ATP...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/ALATA_L2 ALATA_L2] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/HMPK1 HMPK1] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Alanine transaminase
+
** Hydroxymethylpyrimidine kinase (ATP)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[ala__L]][c] '''+''' 1.0 [[pydx5p]][c] '''=>''' 1.0 [[pyam5p]][c] '''+''' 1.0 [[pyr]][c]
+
** 1.0 [[atp]][c] '''+''' 1.0 [[4ahmmp]][c] '''=>''' 1.0 [[adp]][c] '''+''' 1.0 [[4ampm]][c] '''+''' 1.0 [[h]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 L-Alanine[c] '''+''' 1.0 Pyridoxal 5'-phosphate[c] '''=>''' 1.0 Pyridoxamine 5'-phosphate[c] '''+''' 1.0 Pyruvate[c]
+
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 4-Amino-5-hydroxymethyl-2-methylpyrimidine[c] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 4-Amino-2-methyl-5-phosphomethylpyrimidine[c] '''+''' 1.0 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF2550]]
+
* Gene: [[EF0202]]
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* Gene: [[EF2775]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00730]]: [http://www.genome.jp/dbget-bin/www_bget?map00730 map00730]
 +
** '''11''' reactions found over '''24''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30023 30023]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23096 23096]
−
* MetaNetX (MNX) Equation : MNXR95699
+
* BioCyc : META:OHMETPYRKIN-RXN
 +
* MetaNetX (MNX) Equation : MNXR100664
 +
* KEGG Reaction : R03471
 +
* EC Number : 2.7.1.49
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Alanine transaminase}}
+
{{#set: common name=Hydroxymethylpyrimidine kinase (ATP)}}
−
{{#set: gene associated=EF2550}}
+
{{#set: gene associated=EF0202|EF2775}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=map01100|map00730}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655}}
 

Latest revision as of 15:46, 21 March 2018

Reaction HMPK1

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Hydroxymethylpyrimidine kinase (ATP)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 ATP C10H12N5O13P3[c] + 1.0 4-Amino-5-hydroxymethyl-2-methylpyrimidine[c] => 1.0 ADP C10H12N5O10P2[c] + 1.0 4-Amino-2-methyl-5-phosphomethylpyrimidine[c] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:OHMETPYRKIN-RXN
  • MetaNetX (MNX) Equation : MNXR100664
  • KEGG Reaction : R03471
  • EC Number : 2.7.1.49




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