Difference between revisions of "EF2461"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GLYALDDr GLYALDDr] == * direction: ** REVERSIBLE * common name: ** D-Glyceraldehyde dehydrogenase *...")
 
(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00300 map00300] == * common_name: ** Lysine biosynthesis * Synonym(s): == Reaction(s) found == * '...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/GLYALDDr GLYALDDr] ==
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00300 map00300] ==
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* direction:
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* common_name:
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** REVERSIBLE
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** Lysine biosynthesis
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* common name:
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** D-Glyceraldehyde dehydrogenase
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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* '''13''' reaction(s) found
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** 1.0 [[glyald]][c] '''+''' 1.0 [[nad]][c] '''+''' 1.0 [[h2o]][c] '''<=>''' 1.0 [[nadh]][c] '''+''' 1.0 [[glyc__R]][c] '''+''' 2.0 [[h]][c]
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** [[DAPE]]
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* With common name(s):
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** [[DAPDC]]
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** 1.0 D-Glyceraldehyde[c] '''+''' 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 H2O H2O[c] '''<=>''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 1.0 (R)-Glycerate[c] '''+''' 2.0 H+[c]
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** [[UAAGDS]]
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** [[SACCD2]]
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== Genes associated with this reaction  ==
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** [[ASPK]]
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Genes have been associated with this reaction based on different elements listed below.
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** [[SACCD1]]
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* [[EF0253]]
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** [[HSDy]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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** [[ASAD]]
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== Pathways  ==
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** [[THPAT]]
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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** [[UGMDDS]]
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** '''508''' reactions found over '''2349''' reactions in the full pathway
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** [[AASAD3]]
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* [[map00310]]: [http://www.genome.jp/dbget-bin/www_bget?map00310 map00310]
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** [[THDPS]]
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** '''6''' reactions found over '''138''' reactions in the full pathway
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** [[SDPDS]]
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* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
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== Reaction(s) not found ==
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** '''218''' reactions found over '''1054''' reactions in the full pathway
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* '''21''' reaction(s) not found
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* [[map00280]]: [http://www.genome.jp/dbget-bin/www_bget?map00280 map00280]
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** [http://bigg.ucsd.edu/universal/reactions/UGLDDS2 UGLDDS2]
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** '''9''' reactions found over '''155''' reactions in the full pathway
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** [http://bigg.ucsd.edu/universal/reactions/HICITDm HICITDm]
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* [[map00981]]: [http://www.genome.jp/dbget-bin/www_bget?map00981 map00981]
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** [http://bigg.ucsd.edu/universal/reactions/AASAD3m AASAD3m]
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** '''2''' reactions found over '''18''' reactions in the full pathway
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** [http://bigg.ucsd.edu/universal/reactions/UGLDDS1 UGLDDS1]
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* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
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** [http://bigg.ucsd.edu/universal/reactions/ARAT ARAT]
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** '''111''' reactions found over '''715''' reactions in the full pathway
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** [http://bigg.ucsd.edu/universal/reactions/DAPDA DAPDA]
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* [[map00340]]: [http://www.genome.jp/dbget-bin/www_bget?map00340 map00340]
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** [http://bigg.ucsd.edu/universal/reactions/ASADH ASADH]
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** '''17''' reactions found over '''90''' reactions in the full pathway
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** [http://bigg.ucsd.edu/universal/reactions/RH3CD RH3CD]
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* [[map00625]]: [http://www.genome.jp/dbget-bin/www_bget?map00625 map00625]
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** [http://bigg.ucsd.edu/universal/reactions/SDPTA SDPTA]
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** '''3''' reactions found over '''25''' reactions in the full pathway
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** [http://bigg.ucsd.edu/universal/reactions/ASPK_1 ASPK_1]
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* [[map00903]]: [http://www.genome.jp/dbget-bin/www_bget?map00903 map00903]
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** [http://bigg.ucsd.edu/universal/reactions/AASAD2 AASAD2]
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** '''2''' reactions found over '''30''' reactions in the full pathway
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** [http://bigg.ucsd.edu/universal/reactions/RH2CD RH2CD]
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* [[map00620]]: [http://www.genome.jp/dbget-bin/www_bget?map00620 map00620]
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** [http://bigg.ucsd.edu/universal/reactions/CH2ACH CH2ACH]
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** '''31''' reactions found over '''163''' reactions in the full pathway
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** [http://bigg.ucsd.edu/universal/reactions/HSDH HSDH]
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* [[map00410]]: [http://www.genome.jp/dbget-bin/www_bget?map00410 map00410]
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** [http://bigg.ucsd.edu/universal/reactions/HSDxi HSDxi]
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** '''8''' reactions found over '''91''' reactions in the full pathway
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** [http://bigg.ucsd.edu/universal/reactions/LDAPAT LDAPAT]
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* [[map00010]]: [http://www.genome.jp/dbget-bin/www_bget?map00010 map00010]
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** [http://bigg.ucsd.edu/universal/reactions/AATA AATA]
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** '''24''' reactions found over '''149''' reactions in the full pathway
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** [http://bigg.ucsd.edu/universal/reactions/SACCD4m SACCD4m]
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* [[map00561]]: [http://www.genome.jp/dbget-bin/www_bget?map00561 map00561]
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** [http://bigg.ucsd.edu/universal/reactions/ADAPAT ADAPAT]
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** '''7''' reactions found over '''83''' reactions in the full pathway
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** [http://bigg.ucsd.edu/universal/reactions/CH3ACH CH3ACH]
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* [[map00053]]: [http://www.genome.jp/dbget-bin/www_bget?map00053 map00053]
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** [http://bigg.ucsd.edu/universal/reactions/OXAGm OXAGm]
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** '''7''' reactions found over '''50''' reactions in the full pathway
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* [[map00071]]: [http://www.genome.jp/dbget-bin/www_bget?map00071 map00071]
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** '''3''' reactions found over '''167''' reactions in the full pathway
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* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
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** '''156''' reactions found over '''694''' reactions in the full pathway
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* [[map00330]]: [http://www.genome.jp/dbget-bin/www_bget?map00330 map00330]
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** '''24''' reactions found over '''149''' reactions in the full pathway
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* [[map00380]]: [http://www.genome.jp/dbget-bin/www_bget?map00380 map00380]
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** '''7''' reactions found over '''163''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[b_subtilis_subsp_subtilis_str168]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: common_name=Lysine biosynthesis}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30783 30783]
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{{#set: reaction found=13}}
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* Reactome : REACT_R-ATH-6813749
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{{#set: reaction not found=21}}
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* MetaNetX (MNX) Equation : MNXR100310
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* KEGG Reaction : R01752
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* EC Number : 1.2.1.3
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=D-Glyceraldehyde dehydrogenase}}
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{{#set: gene associated=EF0253}}
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{{#set: in pathway=map01100|map00310|map01110|map00280|map00981|map01120|map00340|map00625|map00903|map00620|map00410|map00010|map00561|map00053|map00071|map01130|map00330|map00380}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=b_subtilis_subsp_subtilis_str168}}
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Revision as of 15:33, 10 January 2018

Pathway map00300

  • common_name:
    • Lysine biosynthesis
  • Synonym(s):

Reaction(s) found

Reaction(s) not found

External links

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