Difference between revisions of "L LACD2"

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(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00400 map00400] == * common_name: ** Phenylalanine, tyrosine and tryptophan biosynthesis * Synonym(...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TKT2 TKT2] == * direction: ** REVERSIBLE * common name: ** Transketolase * Synonym(s): == Reaction...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00400 map00400] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/TKT2 TKT2] ==
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* common_name:
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* direction:
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** Phenylalanine, tyrosine and tryptophan biosynthesis
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** REVERSIBLE
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* common name:
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** Transketolase
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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* '''21''' reaction(s) found
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* With identifiers:
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** [[DHQS]]
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** 1.0 [[xu5p__D]][c] '''+''' 1.0 [[e4p]][c] '''<=>''' 1.0 [[g3p]][c] '''+''' 1.0 [[f6p]][c]
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** [[PHETHPTOX]]
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* With common name(s):
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** [[TRPS1]]
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** 1.0 D-Xylulose 5-phosphate[c] '''+''' 1.0 D-Erythrose 4-phosphate[c] '''<=>''' 1.0 Glyceraldehyde 3-phosphate[c] '''+''' 1.0 D-Fructose 6-phosphate[c]
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** [[DHQTi]]
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** [[PPNDH]]
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== Genes associated with this reaction  ==
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** [[PSCVT]]
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== Pathways  ==
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** [[ANS2]]
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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** [[SHK3Dr]]
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** '''460''' reactions found over '''2349''' reactions in the full pathway
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** [[SHKK]]
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* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
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** [[DDPA]]
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** '''179''' reactions found over '''1054''' reactions in the full pathway
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** [[PRAIi]]
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* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
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** [[QUINDH]]
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** '''104''' reactions found over '''715''' reactions in the full pathway
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** [[ANPRT]]
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* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
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** [[CHORS]]
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** '''45''' reactions found over '''220''' reactions in the full pathway
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** [[ANS]]
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* [[map00710]]: [http://www.genome.jp/dbget-bin/www_bget?map00710 map00710]
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** [[ASPTA]]
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** '''16''' reactions found over '''71''' reactions in the full pathway
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** [[ASPO1]]
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* [[map01051]]: [http://www.genome.jp/dbget-bin/www_bget?map01051 map01051]
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** [[IGPS]]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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** [[HSTPT]]
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* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
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** [[CHORM]]
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** '''135''' reactions found over '''694''' reactions in the full pathway
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** [[PHETA1]]
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* [[map00030]]: [http://www.genome.jp/dbget-bin/www_bget?map00030 map00030]
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== Reaction(s) not found ==
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** '''26''' reactions found over '''69''' reactions in the full pathway
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* '''38''' reaction(s) not found
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== Reconstruction information  ==
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** [http://bigg.ucsd.edu/universal/reactions/TRPS2h TRPS2h]
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* [[gap-filling]]:
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** [http://bigg.ucsd.edu/universal/reactions/DPHS DPHS]
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** [[meneco]]:
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** [http://bigg.ucsd.edu/universal/reactions/LCYSTAT LCYSTAT]
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*** [[added for gapfilling]]
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** [http://bigg.ucsd.edu/universal/reactions/ARAT ARAT]
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** [http://bigg.ucsd.edu/universal/reactions/DKFPS2 DKFPS2]
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** [http://bigg.ucsd.edu/universal/reactions/DHQS_1 DHQS_1]
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** [http://bigg.ucsd.edu/universal/reactions/ATNS_nh4 ATNS_nh4]
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** [http://bigg.ucsd.edu/universal/reactions/SKK SKK]
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** [http://bigg.ucsd.edu/universal/reactions/ASPTAp ASPTAp]
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** [http://bigg.ucsd.edu/universal/reactions/ASPOm ASPOm]
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** [http://bigg.ucsd.edu/universal/reactions/AATC AATC]
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** [http://bigg.ucsd.edu/universal/reactions/G3PL G3PL]
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** [http://bigg.ucsd.edu/universal/reactions/3SALATAi 3SALATAi]
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** [http://bigg.ucsd.edu/universal/reactions/ATNS ATNS]
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** [http://bigg.ucsd.edu/universal/reactions/AROH AROH]
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** [http://bigg.ucsd.edu/universal/reactions/ASPTAm ASPTAm]
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** [http://bigg.ucsd.edu/universal/reactions/SERH SERH]
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** [http://bigg.ucsd.edu/universal/reactions/AATG AATG]
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** [http://bigg.ucsd.edu/universal/reactions/PHETA1m PHETA1m]
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** [http://bigg.ucsd.edu/universal/reactions/ASPATh ASPATh]
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** [http://bigg.ucsd.edu/universal/reactions/POATh POATh]
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** [http://bigg.ucsd.edu/universal/reactions/3SALATAim 3SALATAim]
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** [http://bigg.ucsd.edu/universal/reactions/QUIDH QUIDH]
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** [http://bigg.ucsd.edu/universal/reactions/DDPAm DDPAm]
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** [http://bigg.ucsd.edu/universal/reactions/DHSKDH DHSKDH]
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** [http://bigg.ucsd.edu/universal/reactions/CHRM CHRM]
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** [http://bigg.ucsd.edu/universal/reactions/TRPS2 TRPS2]
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** [http://bigg.ucsd.edu/universal/reactions/TRPS3 TRPS3]
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** [http://bigg.ucsd.edu/universal/reactions/LCYSTATm LCYSTATm]
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** [http://bigg.ucsd.edu/universal/reactions/CHRS CHRS]
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** [http://bigg.ucsd.edu/universal/reactions/AOOAh AOOAh]
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** [http://bigg.ucsd.edu/universal/reactions/IGPS_1 IGPS_1]
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** [http://bigg.ucsd.edu/universal/reactions/ANTPPT ANTPPT]
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** [http://bigg.ucsd.edu/universal/reactions/PSCIT PSCIT]
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** [http://bigg.ucsd.edu/universal/reactions/DQDH DQDH]
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** [http://bigg.ucsd.edu/universal/reactions/PRAI PRAI]
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** [http://bigg.ucsd.edu/universal/reactions/SKDH SKDH]
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** [http://bigg.ucsd.edu/universal/reactions/AATGm AATGm]
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== External links  ==
 
== External links  ==
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{{#set: common_name=Phenylalanine, tyrosine and tryptophan biosynthesis}}
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* RHEA:
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{{#set: reaction found=21}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27626 27626]
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{{#set: reaction not found=38}}
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* EC Number : 2.2.1.1
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* MetaNetX (MNX) Equation : MNXR104869
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* KEGG Reaction : R01830
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* BioCyc : META:2TRANSKETO-RXN
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Transketolase}}
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{{#set: in pathway=map01100|map01110|map01120|map01200|map00710|map01051|map01130|map00030}}
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{{#set: reconstruction category=gap-filling}}
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{{#set: reconstruction tool=meneco}}
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{{#set: reconstruction source=added for gapfilling}}

Revision as of 16:36, 10 January 2018

Reaction TKT2

  • direction:
    • REVERSIBLE
  • common name:
    • Transketolase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 D-Xylulose 5-phosphate[c] + 1.0 D-Erythrose 4-phosphate[c] <=> 1.0 Glyceraldehyde 3-phosphate[c] + 1.0 D-Fructose 6-phosphate[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 2.2.1.1
  • MetaNetX (MNX) Equation : MNXR104869
  • KEGG Reaction : R01830
  • BioCyc : META:2TRANSKETO-RXN




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