Difference between revisions of "EF2371"

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(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00720 map00720] == * common_name: ** Carbon fixation pathways in prokaryotes * Synonym(s): == Reac...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ASAD ASAD] == * direction: ** REVERSIBLE * common name: ** Aspartate-semialdehyde dehydrogenase * S...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00720 map00720] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/ASAD ASAD] ==
−
* common_name:
+
* direction:
−
** Carbon fixation pathways in prokaryotes
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** REVERSIBLE
 +
* common name:
 +
** Aspartate-semialdehyde dehydrogenase
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
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== Reaction Formula ==
−
* '''17''' reaction(s) found
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* With identifiers:
−
** [[MSAR]]
+
** 1.0 [[aspsa]][c] '''+''' 1.0 [[nadp]][c] '''+''' 1.0 [[pi]][c] '''<=>''' 1.0 [[h]][c] '''+''' 1.0 [[nadph]][c] '''+''' 1.0 [[4pasp]][c]
−
** [[MDH]]
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* With common name(s):
−
** [[ICDHyr]]
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** 1.0 L-Aspartate 4-semialdehyde[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate[c] '''+''' 1.0 Phosphate[c] '''<=>''' 1.0 H+[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] '''+''' 1.0 4-Phospho-L-aspartate[c]
−
** [[PTA2]]
+
 
−
** [[PTAr]]
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== Genes associated with this reaction  ==
−
** [[MTHFR3]]
+
Genes have been associated with this reaction based on different elements listed below.
−
** [[FTHFLi]]
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* [[EF1183]]
−
** [[PPS]]
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** [[pantograph]]-[[l_plantarum_wcfs1]]
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** [[ACONTa]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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** [[PC]]
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== Pathways  ==
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** [[ACACT1r]]
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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** [[ACONTb]]
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** '''460''' reactions found over '''2349''' reactions in the full pathway
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** [[ACKr]]
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* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
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** [[ACONT]]
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** '''179''' reactions found over '''1054''' reactions in the full pathway
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** [[MTHFC]]
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* [[map00300]]: [http://www.genome.jp/dbget-bin/www_bget?map00300 map00300]
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** [[ACCOAC]]
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** '''13''' reactions found over '''34''' reactions in the full pathway
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** [[MTHFD]]
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* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
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== Reaction(s) not found ==
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** '''104''' reactions found over '''715''' reactions in the full pathway
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* '''140''' reaction(s) not found
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* [[map01210]]: [http://www.genome.jp/dbget-bin/www_bget?map01210 map01210]
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** [http://bigg.ucsd.edu/universal/reactions/T2M26DCOAHLx T2M26DCOAHLx]
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** '''14''' reactions found over '''80''' reactions in the full pathway
−
** [http://bigg.ucsd.edu/universal/reactions/T2M26DCOAHLm T2M26DCOAHLm]
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* [[map00270]]: [http://www.genome.jp/dbget-bin/www_bget?map00270 map00270]
−
** [http://bigg.ucsd.edu/universal/reactions/HACD2m HACD2m]
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** '''25''' reactions found over '''135''' reactions in the full pathway
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** [http://bigg.ucsd.edu/universal/reactions/HMNO HMNO]
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* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
−
** [http://bigg.ucsd.edu/universal/reactions/HACD3i HACD3i]
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** '''56''' reactions found over '''228''' reactions in the full pathway
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** [http://bigg.ucsd.edu/universal/reactions/HACD3m HACD3m]
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* [[map00260]]: [http://www.genome.jp/dbget-bin/www_bget?map00260 map00260]
−
** [http://bigg.ucsd.edu/universal/reactions/HBCO_nadp HBCO_nadp]
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** '''23''' reactions found over '''133''' reactions in the full pathway
−
** [http://bigg.ucsd.edu/universal/reactions/HACD2_1 HACD2_1]
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* [[map00261]]: [http://www.genome.jp/dbget-bin/www_bget?map00261 map00261]
−
** [http://bigg.ucsd.edu/universal/reactions/ICDHym ICDHym]
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** '''3''' reactions found over '''8''' reactions in the full pathway
−
** [http://bigg.ucsd.edu/universal/reactions/ACACT4r ACACT4r]
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* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
−
** [http://bigg.ucsd.edu/universal/reactions/ACACT4p ACACT4p]
+
** '''135''' reactions found over '''694''' reactions in the full pathway
−
** [http://bigg.ucsd.edu/universal/reactions/ACACT4m ACACT4m]
+
== Reconstruction information  ==
−
** [http://bigg.ucsd.edu/universal/reactions/HBCO_nadp_m HBCO_nadp_m]
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* [[orthology]]:
−
** [http://bigg.ucsd.edu/universal/reactions/ACACT6m ACACT6m]
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** [[pantograph]]:
−
** [http://bigg.ucsd.edu/universal/reactions/ACACT3m ACACT3m]
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*** [[l_plantarum_wcfs1]]
−
** [http://bigg.ucsd.edu/universal/reactions/ACONTx ACONTx]
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*** [[b_subtilis_subsp_subtilis_str168]]
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** [http://bigg.ucsd.edu/universal/reactions/FTHFLmi FTHFLmi]
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−
** [http://bigg.ucsd.edu/universal/reactions/PCm PCm]
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−
** [http://bigg.ucsd.edu/universal/reactions/HIBDkt HIBDkt]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACACT3r ACACT3r]
+
−
** [http://bigg.ucsd.edu/universal/reactions/MTHFR2_1 MTHFR2_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACONTm ACONTm]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD2i HACD2i]
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−
** [http://bigg.ucsd.edu/universal/reactions/SUCLm SUCLm]
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−
** [http://bigg.ucsd.edu/universal/reactions/ECOAH9ir ECOAH9ir]
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−
** [http://bigg.ucsd.edu/universal/reactions/KAT1 KAT1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD9m HACD9m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACKrh ACKrh]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ECOAH1x ECOAH1x]
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−
** [http://bigg.ucsd.edu/universal/reactions/HACD5m HACD5m]
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−
** [http://bigg.ucsd.edu/universal/reactions/ECOAH9m ECOAH9m]
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−
** [http://bigg.ucsd.edu/universal/reactions/HACD5i HACD5i]
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−
** [http://bigg.ucsd.edu/universal/reactions/ECOAH1m ECOAH1m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/GHBDHy GHBDHy]
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−
** [http://bigg.ucsd.edu/universal/reactions/HACD5p HACD5p]
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−
** [http://bigg.ucsd.edu/universal/reactions/MTHFC_1 MTHFC_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/FUM FUM]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACACT2 ACACT2]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACDp HACDp]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACITL ACITL]
+
−
** [http://bigg.ucsd.edu/universal/reactions/FRDm FRDm]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ECOAH11p ECOAH11p]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACACT6p ACACT6p]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACACT6r ACACT6r]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ICDHhr ICDHhr]
+
−
** [http://bigg.ucsd.edu/universal/reactions/PCPPTh PCPPTh]
+
−
** [http://bigg.ucsd.edu/universal/reactions/PTArh PTArh]
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−
** [http://bigg.ucsd.edu/universal/reactions/PCPPTm PCPPTm]
+
−
** [http://bigg.ucsd.edu/universal/reactions/PTArm PTArm]
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−
** [http://bigg.ucsd.edu/universal/reactions/MTHFDm MTHFDm]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD3_1 HACD3_1]
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−
** [http://bigg.ucsd.edu/universal/reactions/ACACT3 ACACT3]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD4m HACD4m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ECOAH12 ECOAH12]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD4i HACD4i]
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−
** [http://bigg.ucsd.edu/universal/reactions/SUCOASm SUCOASm]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ECOAH1_1 ECOAH1_1]
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−
** [http://bigg.ucsd.edu/universal/reactions/HACD4p HACD4p]
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−
** [http://bigg.ucsd.edu/universal/reactions/ITCOALm ITCOALm]
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−
** [http://bigg.ucsd.edu/universal/reactions/HACD1 HACD1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD3 HACD3]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD2 HACD2]
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−
** [http://bigg.ucsd.edu/universal/reactions/PPCOACm PPCOACm]
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−
** [http://bigg.ucsd.edu/universal/reactions/HACD4 HACD4]
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−
** [http://bigg.ucsd.edu/universal/reactions/HACD7 HACD7]
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−
** [http://bigg.ucsd.edu/universal/reactions/HACD6 HACD6]
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−
** [http://bigg.ucsd.edu/universal/reactions/HACD9 HACD9]
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** [http://bigg.ucsd.edu/universal/reactions/ACCOAC_1 ACCOAC_1]
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−
** [http://bigg.ucsd.edu/universal/reactions/ACACT5p ACACT5p]
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−
** [http://bigg.ucsd.edu/universal/reactions/ACACT5r ACACT5r]
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−
** [http://bigg.ucsd.edu/universal/reactions/ECOAH1 ECOAH1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACACT5m ACACT5m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/PPDKh PPDKh]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ECOAH12m ECOAH12m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/C2M26DCOAHLx C2M26DCOAHLx]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD7m HACD7m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD7i HACD7i]
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−
** [http://bigg.ucsd.edu/universal/reactions/CITMCOALm CITMCOALm]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACS ACS]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACKrm ACKrm]
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−
** [http://bigg.ucsd.edu/universal/reactions/MTHFR2 MTHFR2]
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−
** [http://bigg.ucsd.edu/universal/reactions/C2M26DCOAHLm C2M26DCOAHLm]
+
−
** [http://bigg.ucsd.edu/universal/reactions/MTHFD_1 MTHFD_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HADPCOADH3 HADPCOADH3]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD7p HACD7p]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD1_1 HACD1_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD10p HACD10p]
+
−
** [http://bigg.ucsd.edu/universal/reactions/MMM2 MMM2]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACCOACrm ACCOACrm]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ECH_3hivcoa ECH_3hivcoa]
+
−
** [http://bigg.ucsd.edu/universal/reactions/MTHFDm_1 MTHFDm_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACACT10m ACACT10m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/FRD FRD]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD6i HACD6i]
+
−
** [http://bigg.ucsd.edu/universal/reactions/DHACOAH DHACOAH]
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−
** [http://bigg.ucsd.edu/universal/reactions/HACD6m HACD6m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/3HOPCD 3HOPCD]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD6p HACD6p]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACACT7r ACACT7r]
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−
** [http://bigg.ucsd.edu/universal/reactions/MTHFO MTHFO]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACACT7p ACACT7p]
+
−
** [http://bigg.ucsd.edu/universal/reactions/MMEm MMEm]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD5 HACD5]
+
−
** [http://bigg.ucsd.edu/universal/reactions/PPCOAC PPCOAC]
+
−
** [http://bigg.ucsd.edu/universal/reactions/MTHFCx MTHFCx]
+
−
** [http://bigg.ucsd.edu/universal/reactions/MACCOAT MACCOAT]
+
−
** [http://bigg.ucsd.edu/universal/reactions/MMMm MMMm]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACACT1x ACACT1x]
+
−
** [http://bigg.ucsd.edu/universal/reactions/MME MME]
+
−
** [http://bigg.ucsd.edu/universal/reactions/MTHFCm MTHFCm]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACACT2m ACACT2m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD1m HACD1m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/SSCOARy SSCOARy]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ICDHyp ICDHyp]
+
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** [http://bigg.ucsd.edu/universal/reactions/ACSp ACSp]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACSm ACSm]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD1x HACD1x]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACACT2r ACACT2r]
+
−
** [http://bigg.ucsd.edu/universal/reactions/PPC PPC]
+
−
** [http://bigg.ucsd.edu/universal/reactions/FUMm FUMm]
+
−
** [http://bigg.ucsd.edu/universal/reactions/PPDK PPDK]
+
−
** [http://bigg.ucsd.edu/universal/reactions/FRDcm FRDcm]
+
−
** [http://bigg.ucsd.edu/universal/reactions/SUCD1m SUCD1m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/SUCOAS SUCOAS]
+
−
** [http://bigg.ucsd.edu/universal/reactions/SUCDHh SUCDHh]
+
−
** [http://bigg.ucsd.edu/universal/reactions/MDHf MDHf]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACACT7m ACACT7m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/SUCD1 SUCD1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/MDHm MDHm]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACACT1m ACACT1m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/SUCD3_u6m SUCD3_u6m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/MDHh MDHh]
+
−
** [http://bigg.ucsd.edu/universal/reactions/MTHFR3_1 MTHFR3_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/MDHp MDHp]
+
−
** [http://bigg.ucsd.edu/universal/reactions/MTHFO_nadp MTHFO_nadp]
+
−
** [http://bigg.ucsd.edu/universal/reactions/SUCD2_u6m SUCD2_u6m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACCOAhi ACCOAhi]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD1i HACD1i]
+
−
** [http://bigg.ucsd.edu/universal/reactions/MTHFCm_1 MTHFCm_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/MDHi2 MDHi2]
+
 
== External links  ==
 
== External links  ==
−
{{#set: common_name=Carbon fixation pathways in prokaryotes}}
+
* RHEA:
−
{{#set: reaction found=17}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24284 24284]
−
{{#set: reaction not found=140}}
+
* BioCyc : META:ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN
 +
* MetaNetX (MNX) Equation : MNXR96039
 +
* KEGG Reaction : R02291
 +
* EC Number : 1.2.1.11
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Aspartate-semialdehyde dehydrogenase}}
 +
{{#set: gene associated=EF1183}}
 +
{{#set: in pathway=map01100|map01110|map00300|map01120|map01210|map00270|map01230|map00260|map00261|map01130}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}

Revision as of 16:38, 10 January 2018

Reaction ASAD

  • direction:
    • REVERSIBLE
  • common name:
    • Aspartate-semialdehyde dehydrogenase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 L-Aspartate 4-semialdehyde[c] + 1.0 Nicotinamide adenine dinucleotide phosphate[c] + 1.0 Phosphate[c] <=> 1.0 H+[c] + 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] + 1.0 4-Phospho-L-aspartate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN
  • MetaNetX (MNX) Equation : MNXR96039
  • KEGG Reaction : R02291
  • EC Number : 1.2.1.11




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