Difference between revisions of "Na1"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ILETRS ILETRS] == * direction: ** LEFT-TO-RIGHT * common name: ** Isoleucyl-tRNA synthetase * Synon...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GLYCLTDy GLYCLTDy] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycolate dehydrogenase (NADP...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/ILETRS ILETRS] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/GLYCLTDy GLYCLTDy] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Isoleucyl-tRNA synthetase
+
** Glycolate dehydrogenase (NADP)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[atp]][c] '''+''' 1.0 [[trnaile]][c] '''+''' 1.0 [[ile__L]][c] '''=>''' 1.0 [[ppi]][c] '''+''' 1.0 [[iletrna]][c] '''+''' 1.0 [[amp]][c]
+
** 1.0 [[h]][c] '''+''' 1.0 [[nadph]][c] '''+''' 1.0 [[glx]][c] '''=>''' 1.0 [[glyclt]][c] '''+''' 1.0 [[nadp]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 TRNA(Ile)[c] '''+''' 1.0 L-Isoleucine[c] '''=>''' 1.0 Diphosphate[c] '''+''' 1.0 L-Isoleucyl-tRNA(Ile)[c] '''+''' 1.0 AMP C10H12N5O7P[c]
+
** 1.0 H+[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] '''+''' 1.0 Glyoxylate[c] '''=>''' 1.0 Glycolate C2H3O3[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF1003]]
+
* [[EF3141]]
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[map00970]]: [http://www.genome.jp/dbget-bin/www_bget?map00970 map00970]
+
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''23''' reactions found over '''49''' reactions in the full pathway
+
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00630]]: [http://www.genome.jp/dbget-bin/www_bget?map00630 map00630]
 +
** '''21''' reactions found over '''129''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''179''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 +
** '''104''' reactions found over '''715''' reactions in the full pathway
 +
* [[map00620]]: [http://www.genome.jp/dbget-bin/www_bget?map00620 map00620]
 +
** '''31''' reactions found over '''163''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
 
*** [[e_coli_sstr_k12_substr_mg1655]]
 
*** [[e_coli_sstr_k12_substr_mg1655]]
−
*** [[l_plantarum_wcfs1]]
 
 
== External links  ==
 
== External links  ==
−
* Reactome : REACT_R-HSA-379893
+
* EC Number : 1.1.1.79
−
* MetaNetX (MNX) Equation : MNXR100820
+
* BioCyc : META:GLYOXYLATE-REDUCTASE-NADP+-RXN
−
* KEGG Reaction : R03656
+
* MetaNetX (MNX) Equation : MNXR100332
−
* EC Number : 6.1.1.5
+
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10992 10992]
 +
* Reactome : REACT_R-ATH-389826
 +
* KEGG Reaction : R00465
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Isoleucyl-tRNA synthetase}}
+
{{#set: common name=Glycolate dehydrogenase (NADP)}}
−
{{#set: gene associated=EF1003}}
+
{{#set: gene associated=EF3141}}
−
{{#set: in pathway=map00970}}
+
{{#set: in pathway=map01100|map00630|map01110|map01120|map00620}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1}}
+
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655}}

Revision as of 15:47, 10 January 2018

Reaction GLYCLTDy

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Glycolate dehydrogenase (NADP)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H+[c] + 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] + 1.0 Glyoxylate[c] => 1.0 Glycolate C2H3O3[c] + 1.0 Nicotinamide adenine dinucleotide phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 1.1.1.79
  • BioCyc : META:GLYOXYLATE-REDUCTASE-NADP+-RXN
  • MetaNetX (MNX) Equation : MNXR100332
  • RHEA:
  • Reactome : REACT_R-ATH-389826
  • KEGG Reaction : R00465




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