Difference between revisions of "PPNDH"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ACCOAC ACCOAC] == * direction: ** LEFT-TO-RIGHT * common name: ** Acetyl-CoA carboxylase * Synonym(...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CYANST CYANST] == * direction: ** LEFT-TO-RIGHT * common name: ** Cyanide sulfurtransferase * Synon...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/ACCOAC ACCOAC] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/CYANST CYANST] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Acetyl-CoA carboxylase
+
** Cyanide sulfurtransferase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[accoa]][c] '''+''' 1.0 [[hco3]][c] '''+''' 1.0 [[atp]][c] '''=>''' 1.0 [[pi]][c] '''+''' 1.0 [[malcoa]][c] '''+''' 1.0 [[adp]][c] '''+''' 1.0 [[h]][c]
+
** 1.0 [[tsul]][c] '''+''' 1.0 [[cyan]][c] '''=>''' 1.0 [[tcynt]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[so3]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Acetyl-CoA[c] '''+''' 1.0 Bicarbonate[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''=>''' 1.0 Phosphate[c] '''+''' 1.0 Malonyl CoA C24H33N7O19P3S[c] '''+''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 H+[c]
+
** 1.0 Thiosulfate[c] '''+''' 1.0 Hydrogen cyanide[c] '''=>''' 1.0 Thiocyanate[c] '''+''' 1.0 H+[c] '''+''' 1.0 Sulfite[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF2875]]
+
* [[EF2990]]
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
* [[EF2988]]
−
* [[EF2876]]
+
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
−
* [[EF2879]]
 
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
−
* [[EF2877]]
 
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
−
* [[EF3240]]
 
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
+
* [[map00920]]: [http://www.genome.jp/dbget-bin/www_bget?map00920 map00920]
−
** '''508''' reactions found over '''2349''' reactions in the full pathway
+
** '''5''' reactions found over '''56''' reactions in the full pathway
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
+
−
** '''218''' reactions found over '''1054''' reactions in the full pathway
+
−
* [[map00640]]: [http://www.genome.jp/dbget-bin/www_bget?map00640 map00640]
+
−
** '''15''' reactions found over '''143''' reactions in the full pathway
+
 
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
−
** '''111''' reactions found over '''715''' reactions in the full pathway
+
** '''104''' reactions found over '''715''' reactions in the full pathway
−
* [[map01212]]: [http://www.genome.jp/dbget-bin/www_bget?map01212 map01212]
+
−
** '''36''' reactions found over '''182''' reactions in the full pathway
+
−
* [[map00720]]: [http://www.genome.jp/dbget-bin/www_bget?map00720 map00720]
+
−
** '''17''' reactions found over '''157''' reactions in the full pathway
+
−
* [[map00620]]: [http://www.genome.jp/dbget-bin/www_bget?map00620 map00620]
+
−
** '''31''' reactions found over '''163''' reactions in the full pathway
+
−
* [[map00061]]: [http://www.genome.jp/dbget-bin/www_bget?map00061 map00061]
+
−
** '''65''' reactions found over '''160''' reactions in the full pathway
+
−
* [[map00254]]: [http://www.genome.jp/dbget-bin/www_bget?map00254 map00254]
+
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
−
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
+
−
** '''50''' reactions found over '''220''' reactions in the full pathway
+
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
+
−
** '''156''' reactions found over '''694''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
 
*** [[e_coli_sstr_k12_substr_mg1655]]
 
*** [[e_coli_sstr_k12_substr_mg1655]]
−
*** [[l_plantarum_wcfs1]]
 
−
*** [[b_subtilis_subsp_subtilis_str168]]
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11308 11308]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16881 16881]
−
* BioCyc : META:ACETYL-COA-CARBOXYLTRANSFER-RXN
+
* BioCyc : META:THIOSULFATE-SULFURTRANSFERASE-RXN
−
* MetaNetX (MNX) Equation : MNXR95219
+
* MetaNetX (MNX) Equation : MNXR96956
−
* KEGG Reaction : R00742
+
* KEGG Reaction : R01931
−
* EC Number : 6.4.1.2
+
* EC Number : 2.8.1.1
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Acetyl-CoA carboxylase}}
+
{{#set: common name=Cyanide sulfurtransferase}}
−
{{#set: gene associated=EF2875|EF2876|EF2879|EF2877|EF3240}}
+
{{#set: gene associated=EF2990|EF2988}}
−
{{#set: in pathway=map01100|map01110|map00640|map01120|map01212|map00720|map00620|map00061|map00254|map01200|map01130}}
+
{{#set: in pathway=map00920|map01120}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
+
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655}}

Revision as of 16:48, 10 January 2018

Reaction CYANST

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Cyanide sulfurtransferase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Thiosulfate[c] + 1.0 Hydrogen cyanide[c] => 1.0 Thiocyanate[c] + 1.0 H+[c] + 1.0 Sulfite[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:THIOSULFATE-SULFURTRANSFERASE-RXN
  • MetaNetX (MNX) Equation : MNXR96956
  • KEGG Reaction : R01931
  • EC Number : 2.8.1.1




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