Difference between revisions of "CHORS"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/SUCCt2r SUCCt2r] == * direction: ** REVERSIBLE * common name: ** Succinate transport via proton sym...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TMPPP TMPPP] == * direction: ** LEFT-TO-RIGHT * common name: ** Thiamine-phosphate diphosphorylase...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/SUCCt2r SUCCt2r] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/TMPPP TMPPP] ==
 
* direction:
 
* direction:
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Succinate transport via proton symport
+
** Thiamine-phosphate diphosphorylase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[succ]][e] '''+''' 1.0 [[h]][e] '''<=>''' 1.0 [[h]][c] '''+''' 1.0 [[succ]][c]
+
** 1.0 [[4mpetz]][c] '''+''' 1.0 [[2mahmp]][c] '''+''' 1.0 [[h]][c] '''=>''' 1.0 [[thmmp]][c] '''+''' 1.0 [[ppi]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 Succinate[e] '''+''' 1.0 H+[e] '''<=>''' 1.0 H+[c] '''+''' 1.0 Succinate[c]
+
** 1.0 4-Methyl-5-(2-phosphoethyl)-thiazole[c] '''+''' 1.0 2-Methyl-4-amino-5-hydroxymethylpyrimidine diphosphate[c] '''+''' 1.0 H+[c] '''=>''' 1.0 Thiamin monophosphate[c] '''+''' 1.0 Diphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF0387]]
+
* [[EF2776]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map00730]]: [http://www.genome.jp/dbget-bin/www_bget?map00730 map00730]
 +
** '''11''' reactions found over '''24''' reactions in the full pathway
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
 +
*** [[e_coli_sstr_k12_substr_mg1655]]
 +
*** [[l_plantarum_wcfs1]]
 
*** [[b_subtilis_subsp_subtilis_str168]]
 
*** [[b_subtilis_subsp_subtilis_str168]]
 
== External links  ==
 
== External links  ==
* MetaNetX (MNX) Equation : MNXR104622
+
* RHEA:
{{#set: direction=REVERSIBLE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22328 22328]
{{#set: common name=Succinate transport via proton symport}}
+
* BioCyc : META:THI-P-SYN-RXN
{{#set: gene associated=EF0387}}
+
* MetaNetX (MNX) Equation : MNXR104908
{{#set: in pathway=}}
+
* KEGG Reaction : R03223
 +
* EC Number : 2.5.1.3
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Thiamine-phosphate diphosphorylase}}
 +
{{#set: gene associated=EF2776}}
 +
{{#set: in pathway=map00730|map01100}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=b_subtilis_subsp_subtilis_str168}}
+
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}

Revision as of 15:49, 10 January 2018

Reaction TMPPP

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Thiamine-phosphate diphosphorylase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 4-Methyl-5-(2-phosphoethyl)-thiazole[c] + 1.0 2-Methyl-4-amino-5-hydroxymethylpyrimidine diphosphate[c] + 1.0 H+[c] => 1.0 Thiamin monophosphate[c] + 1.0 Diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:THI-P-SYN-RXN
  • MetaNetX (MNX) Equation : MNXR104908
  • KEGG Reaction : R03223
  • EC Number : 2.5.1.3