Difference between revisions of "EF2481"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/UAMAGS UAMAGS] == * direction: ** LEFT-TO-RIGHT * common name: ** UDP-N-acetylmuramoyl-L-alanyl-D-g...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/LYSt2r LYSt2r] == * direction: ** REVERSIBLE * common name: ** L lysine reversible transport via pr...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/UAMAGS UAMAGS] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/LYSt2r LYSt2r] ==
 
* direction:
 
* direction:
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
** UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
+
** L lysine reversible transport via proton symport
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[uama]][c] '''+''' 1.0 [[glu__D]][c] '''+''' 1.0 [[atp]][c] '''=>''' 1.0 [[uamag]][c] '''+''' 1.0 [[adp]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[pi]][c]
+
** 1.0 [[h]][e] '''+''' 1.0 [[lys__L]][e] '''<=>''' 1.0 [[lys__L]][c] '''+''' 1.0 [[h]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 UDP-N-acetylmuramoyl-L-alanine[c] '''+''' 1.0 D-Glutamate[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''=>''' 1.0 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate[c] '''+''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 H+[c] '''+''' 1.0 Phosphate[c]
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** 1.0 H+[e] '''+''' 1.0 L-Lysine[e] '''<=>''' 1.0 L-Lysine[c] '''+''' 1.0 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF0993]]
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* [[EF1103]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
 
== Pathways  ==
 
== Pathways  ==
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''508''' reactions found over '''2349''' reactions in the full pathway
 
* [[map00471]]: [http://www.genome.jp/dbget-bin/www_bget?map00471 map00471]
 
** '''4''' reactions found over '''10''' reactions in the full pathway
 
* [[map00550]]: [http://www.genome.jp/dbget-bin/www_bget?map00550 map00550]
 
** '''10''' reactions found over '''27''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
*** [[e_coli_sstr_k12_substr_mg1655]]
 
 
*** [[l_plantarum_wcfs1]]
 
*** [[l_plantarum_wcfs1]]
*** [[b_subtilis_subsp_subtilis_str168]]
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16429 16429]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28911 28911]
* BioCyc : META:UDP-NACMURALA-GLU-LIG-RXN
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* MetaNetX (MNX) Equation : MNXR101266
* MetaNetX (MNX) Equation : MNXR105038
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* BioCyc : META:TRANS-RXN-58
* KEGG Reaction : R02783
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{{#set: direction=REVERSIBLE}}
* EC Number : 6.3.2.9
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{{#set: common name=L lysine reversible transport via proton symport}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: gene associated=EF1103}}
{{#set: common name=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase}}
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{{#set: in pathway=}}
{{#set: gene associated=EF0993}}
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{{#set: in pathway=map01100|map00471|map00550}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
+
{{#set: reconstruction source=l_plantarum_wcfs1}}

Revision as of 16:49, 10 January 2018

Reaction LYSt2r

  • direction:
    • REVERSIBLE
  • common name:
    • L lysine reversible transport via proton symport
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H+[e] + 1.0 L-Lysine[e] <=> 1.0 L-Lysine[c] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR101266
  • BioCyc : META:TRANS-RXN-58