Difference between revisions of "EF1338"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TMPPP TMPPP] == * direction: ** LEFT-TO-RIGHT * common name: ** Thiamine-phosphate diphosphorylase...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PMEVK PMEVK] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphomevalonate kinase * Synonym(...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/TMPPP TMPPP] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PMEVK PMEVK] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Thiamine-phosphate diphosphorylase
+
** Phosphomevalonate kinase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[h]][c] '''+''' 1.0 [[2mahmp]][c] '''+''' 1.0 [[4mpetz]][c] '''=>''' 1.0 [[ppi]][c] '''+''' 1.0 [[thmmp]][c]
+
** 1.0 [[atp]][c] '''+''' 1.0 [[5pmev]][c] '''=>''' 1.0 [[adp]][c] '''+''' 1.0 [[5dpmev]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 H+[c] '''+''' 1.0 2-Methyl-4-amino-5-hydroxymethylpyrimidine diphosphate[c] '''+''' 1.0 4-Methyl-5-(2-phosphoethyl)-thiazole[c] '''=>''' 1.0 Diphosphate[c] '''+''' 1.0 Thiamin monophosphate[c]
+
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 R  5 Phosphomevalonate C6H10O7P[c] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 R  5 Diphosphomevalonate C6H10O10P2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF2776]]
+
* [[EF0902]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[map00730]]: [http://www.genome.jp/dbget-bin/www_bget?map00730 map00730]
 
−
** '''11''' reactions found over '''24''' reactions in the full pathway
 
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''508''' reactions found over '''2349''' reactions in the full pathway
+
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 +
** '''135''' reactions found over '''694''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''179''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map00900]]: [http://www.genome.jp/dbget-bin/www_bget?map00900 map00900]
 +
** '''14''' reactions found over '''67''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
−
*** [[e_coli_sstr_k12_substr_mg1655]]
 
 
*** [[l_plantarum_wcfs1]]
 
*** [[l_plantarum_wcfs1]]
−
*** [[b_subtilis_subsp_subtilis_str168]]
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22328 22328]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16341 16341]
−
* BioCyc : META:THI-P-SYN-RXN
+
* BioCyc : META:PHOSPHOMEVALONATE-KINASE-RXN
−
* MetaNetX (MNX) Equation : MNXR104908
+
* MetaNetX (MNX) Equation : MNXR103043
−
* KEGG Reaction : R03223
+
* KEGG Reaction : R03245
−
* EC Number : 2.5.1.3
+
* EC Number : 2.7.4.2
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Thiamine-phosphate diphosphorylase}}
+
{{#set: common name=Phosphomevalonate kinase}}
−
{{#set: gene associated=EF2776}}
+
{{#set: gene associated=EF0902}}
−
{{#set: in pathway=map00730|map01100}}
+
{{#set: in pathway=map01100|map01130|map01110|map00900}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
+
{{#set: reconstruction source=l_plantarum_wcfs1}}

Revision as of 16:49, 10 January 2018

Reaction PMEVK

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Phosphomevalonate kinase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 ATP C10H12N5O13P3[c] + 1.0 R 5 Phosphomevalonate C6H10O7P[c] => 1.0 ADP C10H12N5O10P2[c] + 1.0 R 5 Diphosphomevalonate C6H10O10P2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:PHOSPHOMEVALONATE-KINASE-RXN
  • MetaNetX (MNX) Equation : MNXR103043
  • KEGG Reaction : R03245
  • EC Number : 2.7.4.2




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