Difference between revisions of "3hpp"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/IPDDI IPDDI] == * direction: ** REVERSIBLE * common name: ** Isopentenyl-diphosphate D-isomerase *...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/OAADC OAADC] == * direction: ** LEFT-TO-RIGHT * common name: ** Oxaloacetate decarboxylase * Synony...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/IPDDI IPDDI] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/OAADC OAADC] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Isopentenyl-diphosphate D-isomerase
+
** Oxaloacetate decarboxylase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[ipdp]][c] '''<=>''' 1.0 [[dmpp]][c]
+
** 1.0 [[oaa]][c] '''+''' 1.0 [[h]][c] '''=>''' 1.0 [[pyr]][c] '''+''' 1.0 [[co2]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Isopentenyl diphosphate[c] '''<=>''' 1.0 Dimethylallyl diphosphate[c]
+
** 1.0 Oxaloacetate[c] '''+''' 1.0 H+[c] '''=>''' 1.0 Pyruvate[c] '''+''' 1.0 CO2 CO2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF0901]]
+
* [[EF3134]]
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''508''' reactions found over '''2349''' reactions in the full pathway
+
** '''460''' reactions found over '''2349''' reactions in the full pathway
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
+
* [[map00620]]: [http://www.genome.jp/dbget-bin/www_bget?map00620 map00620]
−
** '''156''' reactions found over '''694''' reactions in the full pathway
+
** '''31''' reactions found over '''163''' reactions in the full pathway
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
+
−
** '''218''' reactions found over '''1054''' reactions in the full pathway
+
−
* [[map00900]]: [http://www.genome.jp/dbget-bin/www_bget?map00900 map00900]
+
−
** '''14''' reactions found over '''67''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
−
*** [[l_plantarum_wcfs1]]
+
*** [[e_coli_sstr_k12_substr_mg1655]]
−
*** [[b_subtilis_subsp_subtilis_str168]]
+
 
== External links  ==
 
== External links  ==
−
* EC Number : 5.3.3.2
 
−
* BioCyc : META:IPPISOM-RXN
 
−
* MetaNetX (MNX) Equation : MNXR100796
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23284 23284]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15641 15641]
−
* Reactome : REACT_R-ATH-191382
+
* BioCyc : META:OXALODECARB-RXN
−
* KEGG Reaction : R01123
+
* MetaNetX (MNX) Equation : MNXR102097
−
{{#set: direction=REVERSIBLE}}
+
* KEGG Reaction : R00217
−
{{#set: common name=Isopentenyl-diphosphate D-isomerase}}
+
* EC Number : 1.1.1.38
−
{{#set: gene associated=EF0901}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: in pathway=map01100|map01130|map01110|map00900}}
+
{{#set: common name=Oxaloacetate decarboxylase}}
 +
{{#set: gene associated=EF3134}}
 +
{{#set: in pathway=map01100|map00620}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
+
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655}}

Revision as of 16:50, 10 January 2018

Reaction OAADC

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Oxaloacetate decarboxylase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Oxaloacetate[c] + 1.0 H+[c] => 1.0 Pyruvate[c] + 1.0 CO2 CO2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:OXALODECARB-RXN
  • MetaNetX (MNX) Equation : MNXR102097
  • KEGG Reaction : R00217
  • EC Number : 1.1.1.38




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