Difference between revisions of "Glucys"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/AGDC AGDC] == * direction: ** LEFT-TO-RIGHT * common name: ** N-acetylglucosamine-6-phosphate deace...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/OIVD1r OIVD1r] == * direction: ** REVERSIBLE * common name: ** 2-oxoisovalerate dehydrogenase (acyl...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/AGDC AGDC] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/OIVD1r OIVD1r] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** N-acetylglucosamine-6-phosphate deacetylase
+
** 2-oxoisovalerate dehydrogenase (acylating; 4-methyl-2-oxopentaoate)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[acgam6p]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[gam6p]][c] '''+''' 1.0 [[ac]][c]
+
** 1.0 [[nad]][c] '''+''' 1.0 [[4mop]][c] '''+''' 1.0 [[coa]][c] '''<=>''' 1.0 [[ivcoa]][c] '''+''' 1.0 [[nadh]][c] '''+''' 1.0 [[co2]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 N-Acetyl-D-glucosamine 6-phosphate[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 D-Glucosamine 6-phosphate[c] '''+''' 1.0 Acetate[c]
+
** 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 4-Methyl-2-oxopentanoate[c] '''+''' 1.0 Coenzyme A[c] '''<=>''' 1.0 Isovaleryl-CoA[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 1.0 CO2 CO2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF3044]]
+
* [[EF1660]]
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
−
* [[EF1317]]
+
* [[EF1658]]
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
* [[EF1661]]
 +
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 +
* [[EF1659]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
−
** '''156''' reactions found over '''694''' reactions in the full pathway
 
−
* [[map00520]]: [http://www.genome.jp/dbget-bin/www_bget?map00520 map00520]
 
−
** '''24''' reactions found over '''80''' reactions in the full pathway
 
−
* [[map00052]]: [http://www.genome.jp/dbget-bin/www_bget?map00052 map00052]
 
−
** '''17''' reactions found over '''67''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
−
*** [[e_coli_sstr_k12_substr_mg1655]]
 
−
*** [[l_plantarum_wcfs1]]
 
 
*** [[b_subtilis_subsp_subtilis_str168]]
 
*** [[b_subtilis_subsp_subtilis_str168]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22936 22936]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25177 25177]
−
* BioCyc : META:NAG6PDEACET-RXN
+
* BioCyc : META:2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN
−
* MetaNetX (MNX) Equation : MNXR95528
+
* MetaNetX (MNX) Equation : MNXR102172
−
* KEGG Reaction : R02059
+
* KEGG Reaction : R01651
−
* EC Number : 3.5.1.25
+
* EC Number : 1.2.1
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=N-acetylglucosamine-6-phosphate deacetylase}}
+
{{#set: common name=2-oxoisovalerate dehydrogenase (acylating; 4-methyl-2-oxopentaoate)}}
−
{{#set: gene associated=EF3044|EF1317}}
+
{{#set: gene associated=EF1660|EF1658|EF1661|EF1659}}
−
{{#set: in pathway=map01130|map00520|map00052}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
+
{{#set: reconstruction source=b_subtilis_subsp_subtilis_str168}}

Revision as of 16:54, 10 January 2018

Reaction OIVD1r

  • direction:
    • REVERSIBLE
  • common name:
    • 2-oxoisovalerate dehydrogenase (acylating; 4-methyl-2-oxopentaoate)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Nicotinamide adenine dinucleotide[c] + 1.0 4-Methyl-2-oxopentanoate[c] + 1.0 Coenzyme A[c] <=> 1.0 Isovaleryl-CoA[c] + 1.0 Nicotinamide adenine dinucleotide - reduced[c] + 1.0 CO2 CO2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN
  • MetaNetX (MNX) Equation : MNXR102172
  • KEGG Reaction : R01651
  • EC Number : 1.2.1




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