Difference between revisions of "EF2569"

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(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/atp atp] == * common name: ** ATP C10H12N5O13P3 * Synonym(s): == Reaction(s) known to consum...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NTD7 NTD7] == * direction: ** LEFT-TO-RIGHT * common name: ** 5'-nucleotidase (AMP) * Synonym(s):...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
== Metabolite [http://bigg.ucsd.edu/universal/metabolites/atp atp] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/NTD7 NTD7] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** ATP C10H12N5O13P3
+
** 5'-nucleotidase (AMP)
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
* [[NMNAT]]
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* With identifiers:
* [[DRBK]]
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** 1.0 [[h2o]][c] '''+''' 1.0 [[amp]][c] '''=>''' 1.0 [[adn]][c] '''+''' 1.0 [[pi]][c]
* [[PROTRS]]
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* With common name(s):
* [[GLYTRS]]
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** 1.0 H2O H2O[c] '''+''' 1.0 AMP C10H12N5O7P[c] '''=>''' 1.0 Adenosine[c] '''+''' 1.0 Phosphate[c]
* [[UAMAGS]]
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* [[PFK_2]]
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== Genes associated with this reaction  ==
* [[GLNS]]
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Genes have been associated with this reaction based on different elements listed below.
* [[ARGabc]]
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* [[EF0062]]
* [[GLYBabc]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
* [[PRAIS]]
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== Pathways  ==
* [[TYRTRS]]
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* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
* [[UDCPKr]]
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** '''82''' reactions found over '''244''' reactions in the full pathway
* [[HMPK1]]
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
* [[MPTAT]]
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** '''460''' reactions found over '''2349''' reactions in the full pathway
* [[HSK]]
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* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
* [[METabc]]
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** '''179''' reactions found over '''1054''' reactions in the full pathway
* [[PRFGS_1]]
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* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
* [[LYSTRS]]
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** '''97''' reactions found over '''298''' reactions in the full pathway
* [[GLUTRS]]
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* [[map00760]]: [http://www.genome.jp/dbget-bin/www_bget?map00760 map00760]
* [[RBFK]]
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** '''19''' reactions found over '''97''' reactions in the full pathway
* [[RNTR1]]
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== Reconstruction information  ==
* [[FERRICHabc]]
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* [[orthology]]:
* [[ASNS2]]
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** [[pantograph]]:
* [[PTPATi]]
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*** [[b_subtilis_subsp_subtilis_str168]]
* [[ATPPRT]]
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* [[MOADCST]]
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* [[PANTS]]
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* [[NADS1]]
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* [[PRFGS]]
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* [[ASNS1]]
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* [[CA2abc1]]
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* [[CTBTCAL2]]
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* [[DAGK_LPL]]
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* [[ADNK1]]
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* [[PURabc1]]
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* [[LEUTRS]]
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* [[SERTRS2]]
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* [[NTP1]]
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* [[PMEVK]]
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* [[SUCBZL]]
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* [[NO3abc]]
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* [[DGNSK]]
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* [[CD2abc1]]
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* [[CRNDCAL2]]
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* [[ASNTRS]]
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* [[AP4AS]]
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* [[VALTRS]]
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* [[DBTS]]
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* [[NIabc]]
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* [[SPMDabc]]
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* [[GTPDPK]]
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* [[FMNAT]]
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* [[UAMAS]]
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* [[DHBS]]
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* [[GLU5K]]
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* [[ARSENBabc]]
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* [[SHKK]]
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* [[GLYCK2]]
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* [[CHCOAL]]
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* [[PTRCabc]]
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* [[PC]]
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* [[MEVK1]]
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* [[PROTS_LPL_v60]]
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* [[MG2abc]]
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* [[ZNabc]]
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* [[GALK2]]
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* [[DXYLK]]
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* [[biomass_LPL60]]
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* [[METSRabc]]
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* [[CYTDK1]]
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* [[DALTAL]]
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* [[ASNTRS_1]]
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* [[GTHS]]
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* [[CHLabc]]
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* [[RBK]]
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* [[LIPO3S24_BS]]
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* [[NADK]]
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* [[PNTK]]
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* [[MALTabc]]
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* [[UGMDDS2_LPL]]
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* [[DPMVD]]
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* [[HPPK]]
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* [[OCTNLL]]
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* [[DAGK_BS]]
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* [[CRNCAL2]]
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* [[GLUCYS]]
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* [[CTPS2]]
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* [[CTPS1]]
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* [[CRNabc]]
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* [[FRULYSK]]
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* [[RMK]]
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* [[CYSTRS]]
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* [[ARGSS]]
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* [[UAAGLS1]]
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* [[Cut1]]
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* [[AIRC1]]
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* [[AIRC2]]
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* [[CBPS]]
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* [[URIDK2r_copy1]]
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* [[GDPDPK]]
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* [[MNabc]]
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* [[GLYCK]]
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* [[PHETRS]]
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* [[ARGSS_1]]
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* [[UGMDDS]]
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* [[GLNabc]]
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* [[TMDK1]]
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* [[DADNK]]
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* [[UAAGDS]]
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* [[THRTRS]]
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* [[DDGLK]]
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* [[FRUK]]
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* [[TMDPK]]
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* [[XYLK]]
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* [[RNAS_LPL]]
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* [[HETZK]]
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* [[PMPK]]
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* [[HISTRS]]
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* [[PRAIS_1]]
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* [[DHFS]]
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* [[FERXAabc]]
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* [[ARGTRS]]
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* [[COBALT2abcpppe]]
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* [[DURIK1]]
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* [[PIabc]]
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* [[ECTOINEabc]]
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* [[HEX1]]
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* [[GNK]]
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* [[CYSabc2pppe]]
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* [[URIK1]]
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* [[HEX7]]
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* [[LIPATPT]]
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* [[METTRS]]
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* [[DARTAL]]
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* [[CHOLSabc_1]]
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* [[PPS]]
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* [[ALATRS]]
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* [[DNAS_LPL]]
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* [[GBBTNabc]]
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* [[ASPTRS]]
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* [[TRPTRS]]
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* [[TPRDCOAS]]
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* [[TECA2S45]]
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* [[HPPK2]]
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* [[DPCOAK]]
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* [[METDabc]]
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* [[FTHFLi]]
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* [[METAT]]
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* [[SERTRS]]
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* [[PFK_3]]
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* [[FTHFCL]]
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* [[METSabc]]
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* [[NI2abcpppe]]
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* [[ILETRS]]
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* [[CTBTabc]]
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* [[GMPS2]]
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* [[SELNPS]]
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* [[PFK]]
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* [[PROLBabc]]
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* [[ZN2abcpppe]]
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* [[GLYK]]
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* [[CDPMEK]]
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* [[ACCOAC]]
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* [[DINSK]]
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== Reaction(s) known to produce the compound ==
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* [[AP5AH]]
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* [[PYK]]
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== Reaction(s) of unknown directionality ==
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* [[PRPPS]]
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* [[CYTK1]]
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* [[CYTK2]]
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* [[URIDK2r]]
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* [[PGK_1]]
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* [[ALALAC]]
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* [[PRASCSi_copy1]]
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* [[ATPS3r]]
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* [[UMPK]]
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* [[ACKr]]
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* [[CBMKr]]
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* [[ASPK]]
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* [[CKc]]
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* [[GK1]]
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* [[PGK]]
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* [[PRASCSi]]
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* [[ADK1]]
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* [[NDPK8]]
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* [[NDPK9]]
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* [[GNKr]]
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* [[NDPK3]]
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* [[GLNTAL]]
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* [[CKc_cho]]
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* [[NDPK6]]
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* [[NDPK7]]
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* [[NDPK4]]
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* [[NDPK5]]
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* [[URIDK2r_copy2]]
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* [[DGK1]]
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* [[APNPT]]
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* [[PPAKr]]
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* [[NDPK2]]
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* [[BUTKr]]
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* [[NNATr]]
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* [[PRAGSr]]
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* [[NDPK1]]
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* [[THFGLUS]]
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* [[GALKr]]
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* [[DADK]]
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* [[SERASr]]
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* [[ALAALAr]]
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* [[DTMPK]]
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* [[ADADir]]
+
 
== External links  ==
 
== External links  ==
{{#set: common name=ATP C10H12N5O13P3}}
+
* RHEA:
{{#set: consumed by=NMNAT|DRBK|PROTRS|GLYTRS|UAMAGS|PFK_2|GLNS|ARGabc|GLYBabc|PRAIS|TYRTRS|UDCPKr|HMPK1|MPTAT|HSK|METabc|PRFGS_1|LYSTRS|GLUTRS|RBFK|RNTR1|FERRICHabc|ASNS2|PTPATi|ATPPRT|MOADCST|PANTS|NADS1|PRFGS|ASNS1|CA2abc1|CTBTCAL2|DAGK_LPL|ADNK1|PURabc1|LEUTRS|SERTRS2|NTP1|PMEVK|SUCBZL|NO3abc|DGNSK|CD2abc1|CRNDCAL2|ASNTRS|AP4AS|VALTRS|DBTS|NIabc|SPMDabc|GTPDPK|FMNAT|UAMAS|DHBS|GLU5K|ARSENBabc|SHKK|GLYCK2|CHCOAL|PTRCabc|PC|MEVK1|PROTS_LPL_v60|MG2abc|ZNabc|GALK2|DXYLK|biomass_LPL60|METSRabc|CYTDK1|DALTAL|ASNTRS_1|GTHS|CHLabc|RBK|LIPO3S24_BS|NADK|PNTK|MALTabc|UGMDDS2_LPL|DPMVD|HPPK|OCTNLL|DAGK_BS|CRNCAL2|GLUCYS|CTPS2|CTPS1|CRNabc|FRULYSK|RMK|CYSTRS|ARGSS|UAAGLS1|Cut1|AIRC1|AIRC2|CBPS|URIDK2r_copy1|GDPDPK|MNabc|GLYCK|PHETRS|ARGSS_1|UGMDDS|GLNabc|TMDK1|DADNK|UAAGDS|THRTRS|DDGLK|FRUK|TMDPK|XYLK|RNAS_LPL|HETZK|PMPK|HISTRS|PRAIS_1|DHFS|FERXAabc|ARGTRS|COBALT2abcpppe|DURIK1|PIabc|ECTOINEabc|HEX1|GNK|CYSabc2pppe|URIK1|HEX7|LIPATPT|METTRS|DARTAL|CHOLSabc_1|PPS|ALATRS|DNAS_LPL|GBBTNabc|ASPTRS|TRPTRS|TPRDCOAS|TECA2S45|HPPK2|DPCOAK|METDabc|FTHFLi|METAT|SERTRS|PFK_3|FTHFCL|METSabc|NI2abcpppe|ILETRS|CTBTabc|GMPS2|SELNPS|PFK|PROLBabc|ZN2abcpppe|GLYK|CDPMEK|ACCOAC|DINSK}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29375 29375]
{{#set: produced by=AP5AH|PYK}}
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* BioCyc : META:AMP-DEPHOSPHORYLATION-RXN
{{#set: consumed or produced by=PRPPS|CYTK1|CYTK2|URIDK2r|PGK_1|ALALAC|PRASCSi_copy1|ATPS3r|UMPK|ACKr|CBMKr|ASPK|CKc|GK1|PGK|PRASCSi|ADK1|NDPK8|NDPK9|GNKr|NDPK3|GLNTAL|CKc_cho|NDPK6|NDPK7|NDPK4|NDPK5|URIDK2r_copy2|DGK1|APNPT|PPAKr|NDPK2|BUTKr|NNATr|PRAGSr|NDPK1|THFGLUS|GALKr|DADK|SERASr|ALAALAr|DTMPK|ADADir}}
+
* MetaNetX (MNX) Equation : MNXR102037
 +
* KEGG Reaction : R00183
 +
* EC Number : 3.1.3.5
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=5'-nucleotidase (AMP)}}
 +
{{#set: gene associated=EF0062}}
 +
{{#set: in pathway=map00240|map01100|map01110|map00230|map00760}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=b_subtilis_subsp_subtilis_str168}}

Revision as of 16:57, 10 January 2018

Reaction NTD7

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 5'-nucleotidase (AMP)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H2O H2O[c] + 1.0 AMP C10H12N5O7P[c] => 1.0 Adenosine[c] + 1.0 Phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:AMP-DEPHOSPHORYLATION-RXN
  • MetaNetX (MNX) Equation : MNXR102037
  • KEGG Reaction : R00183
  • EC Number : 3.1.3.5