Difference between revisions of "EF0900"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GALT GALT] == * direction: ** REVERSIBLE * common name: ** Galactose 1 phosphate uridylyltransferas...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/RNDR1 RNDR1] == * direction: ** LEFT-TO-RIGHT * common name: ** Ribonucleoside-diphosphate reductas...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/GALT GALT] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/RNDR1 RNDR1] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Galactose 1 phosphate uridylyltransferase
+
** Ribonucleoside-diphosphate reductase (ADP)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[gal1p]][c] '''+''' 1.0 [[utp]][c] '''+''' 1.0 [[h]][c] '''<=>''' 1.0 [[udpgal]][c] '''+''' 1.0 [[ppi]][c]
+
** 1.0 [[trdrd]][c] '''+''' 1.0 [[adp]][c] '''=>''' 1.0 [[h2o]][c] '''+''' 1.0 [[dadp]][c] '''+''' 1.0 [[trdox]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Alpha-D-Galactose 1-phosphate[c] '''+''' 1.0 UTP C9H11N2O15P3[c] '''+''' 1.0 H+[c] '''<=>''' 1.0 UDPgalactose[c] '''+''' 1.0 Diphosphate[c]
+
** 1.0 Reduced thioredoxin[c] '''+''' 1.0 ADP C10H12N5O10P2[c] '''=>''' 1.0 H2O H2O[c] '''+''' 1.0 DADP C10H12N5O9P2[c] '''+''' 1.0 Oxidized thioredoxin[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF1071]]
+
* [[EF0471]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 +
* [[EF0470]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 +
* [[EF0472]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 +
** '''82''' reactions found over '''244''' reactions in the full pathway
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''508''' reactions found over '''2349''' reactions in the full pathway
+
** '''460''' reactions found over '''2349''' reactions in the full pathway
−
* [[map00520]]: [http://www.genome.jp/dbget-bin/www_bget?map00520 map00520]
+
* [[map00480]]: [http://www.genome.jp/dbget-bin/www_bget?map00480 map00480]
−
** '''24''' reactions found over '''80''' reactions in the full pathway
+
** '''10''' reactions found over '''39''' reactions in the full pathway
−
* [[map00040]]: [http://www.genome.jp/dbget-bin/www_bget?map00040 map00040]
+
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
−
** '''15''' reactions found over '''54''' reactions in the full pathway
+
** '''97''' reactions found over '''298''' reactions in the full pathway
−
* [[map00053]]: [http://www.genome.jp/dbget-bin/www_bget?map00053 map00053]
+
−
** '''7''' reactions found over '''50''' reactions in the full pathway
+
−
* [[map00052]]: [http://www.genome.jp/dbget-bin/www_bget?map00052 map00052]
+
−
** '''17''' reactions found over '''67''' reactions in the full pathway
+
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
+
−
** '''156''' reactions found over '''694''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
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*** [[b_subtilis_subsp_subtilis_str168]]
 
*** [[b_subtilis_subsp_subtilis_str168]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* BioCyc : META:ADPREDUCT-RXN
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14209 14209]
+
* MetaNetX (MNX) Equation : MNXR104060
−
* BioCyc : META:UTPHEXPURIDYLYLTRANS-RXN
+
* KEGG Reaction : R02017
−
* MetaNetX (MNX) Equation : MNXR100014
+
* EC Number : 1.17.4.1
−
* KEGG Reaction : R00502
+
{{#set: direction=LEFT-TO-RIGHT}}
−
* EC Number : 2.7.7.10
+
{{#set: common name=Ribonucleoside-diphosphate reductase (ADP)}}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: gene associated=EF0471|EF0470|EF0472}}
−
{{#set: common name=Galactose 1 phosphate uridylyltransferase}}
+
{{#set: in pathway=map00240|map01100|map00480|map00230}}
−
{{#set: gene associated=EF1071}}
+
−
{{#set: in pathway=map01100|map00520|map00040|map00053|map00052|map01130}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction source=l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
 
{{#set: reconstruction source=l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}

Revision as of 17:00, 10 January 2018

Reaction RNDR1

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Ribonucleoside-diphosphate reductase (ADP)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Reduced thioredoxin[c] + 1.0 ADP C10H12N5O10P2[c] => 1.0 H2O H2O[c] + 1.0 DADP C10H12N5O9P2[c] + 1.0 Oxidized thioredoxin[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • BioCyc : META:ADPREDUCT-RXN
  • MetaNetX (MNX) Equation : MNXR104060
  • KEGG Reaction : R02017
  • EC Number : 1.17.4.1




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