Difference between revisions of "SDPDS"

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(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/2mecdp 2mecdp] == * common name: ** 2-C-methyl-D-erythritol 2,4-cyclodiphosphate * Synonym(s)...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/AICART AICART] == * direction: ** REVERSIBLE * common name: ** Phosphoribosylaminoimidazolecarboxam...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
== Metabolite [http://bigg.ucsd.edu/universal/metabolites/2mecdp 2mecdp] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/AICART AICART] ==
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* direction:
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** REVERSIBLE
 
* common name:
 
* common name:
** 2-C-methyl-D-erythritol 2,4-cyclodiphosphate
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** Phosphoribosylaminoimidazolecarboxamide formyltransferase
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
== Reaction(s) known to produce the compound ==
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* With identifiers:
* [[MECDPS]]
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** 1.0 [[aicar]][c] '''+''' 1.0 [[10fthf]][c] '''<=>''' 1.0 [[thf]][c] '''+''' 1.0 [[fprica]][c]
== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1.0 5-Amino-1-(5-Phospho-D-ribosyl)imidazole-4-carboxamide[c] '''+''' 1.0 10-Formyltetrahydrofolate[c] '''<=>''' 1.0 5,6,7,8-Tetrahydrofolate[c] '''+''' 1.0 5-Formamido-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[EF1778]]
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** [[pantograph]]-[[l_plantarum_wcfs1]]
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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== Pathways  ==
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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** '''460''' reactions found over '''2349''' reactions in the full pathway
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* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
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** '''135''' reactions found over '''694''' reactions in the full pathway
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* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
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** '''179''' reactions found over '''1054''' reactions in the full pathway
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* [[map00670]]: [http://www.genome.jp/dbget-bin/www_bget?map00670 map00670]
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** '''14''' reactions found over '''65''' reactions in the full pathway
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* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
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** '''97''' reactions found over '''298''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[e_coli_sstr_k12_substr_mg1655]]
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*** [[l_plantarum_wcfs1]]
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*** [[b_subtilis_subsp_subtilis_str168]]
 
== External links  ==
 
== External links  ==
{{#set: common name=2-C-methyl-D-erythritol 2,4-cyclodiphosphate}}
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* RHEA:
{{#set: produced by=MECDPS}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22192 22192]
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* Reactome : REACT_R-ATH-73798
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* MetaNetX (MNX) Equation : MNXR95639
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* KEGG Reaction : R04560
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* EC Number : 2.1.2.3
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Phosphoribosylaminoimidazolecarboxamide formyltransferase}}
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{{#set: gene associated=EF1778}}
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{{#set: in pathway=map01100|map01130|map01110|map00670|map00230}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}

Revision as of 16:03, 10 January 2018

Reaction AICART

  • direction:
    • REVERSIBLE
  • common name:
    • Phosphoribosylaminoimidazolecarboxamide formyltransferase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 5-Amino-1-(5-Phospho-D-ribosyl)imidazole-4-carboxamide[c] + 1.0 10-Formyltetrahydrofolate[c] <=> 1.0 5,6,7,8-Tetrahydrofolate[c] + 1.0 5-Formamido-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • Reactome : REACT_R-ATH-73798
  • MetaNetX (MNX) Equation : MNXR95639
  • KEGG Reaction : R04560
  • EC Number : 2.1.2.3