Difference between revisions of "Idon L"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ExchangeSeed_pydam ExchangeSeed_pydam] == * direction: ** REVERSIBLE * Synonym(s): == Reaction For...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PUNP7 PUNP7] == * direction: ** REVERSIBLE * common name: ** Purine-nucleoside phosphorylase (Xanth...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/ExchangeSeed_pydam ExchangeSeed_pydam] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PUNP7 PUNP7] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 +
* common name:
 +
** Purine-nucleoside phosphorylase (Xanthosine)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[pydam]][C-BOUNDARY] '''<=>''' 1.0 [[pydam]][e]
+
** 1.0 [[pi]][c] '''+''' 1.0 [[xtsn]][c] '''<=>''' 1.0 [[r1p]][c] '''+''' 1.0 [[xan]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 Pyridoxamine[C-BOUNDARY] '''<=>''' 1.0 Pyridoxamine[e]
+
** 1.0 Phosphate[c] '''+''' 1.0 Xanthosine[c] '''<=>''' 1.0 Alpha-D-Ribose 1-phosphate[c] '''+''' 1.0 Xanthine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[EF0187]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 +
* [[EF0186]]
 +
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 +
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 +
** '''82''' reactions found over '''244''' reactions in the full pathway
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''179''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 +
** '''97''' reactions found over '''298''' reactions in the full pathway
 +
* [[map00760]]: [http://www.genome.jp/dbget-bin/www_bget?map00760 map00760]
 +
** '''19''' reactions found over '''97''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[manual]]:
+
* [[orthology]]:
** [[added to manage seeds from boundary to extracellular compartment]]
+
** [[pantograph]]:
 +
*** [[e_coli_sstr_k12_substr_mg1655]]
 +
*** [[l_plantarum_wcfs1]]
 +
*** [[b_subtilis_subsp_subtilis_str168]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27638 27638]
 +
* BioCyc : META:XANTHOSINEPHOSPHORY-RXN
 +
* MetaNetX (MNX) Equation : MNXR103349
 +
* KEGG Reaction : R02297
 +
* EC Number : 2.4.2.-
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
{{#set: in pathway=}}
+
{{#set: common name=Purine-nucleoside phosphorylase (Xanthosine)}}
{{#set: reconstruction category=manual}}
+
{{#set: gene associated=EF0187|EF0186}}
{{#set: reconstruction source=added to manage seeds from boundary to extracellular compartment}}
+
{{#set: in pathway=map00240|map01100|map01110|map00230|map00760}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}

Revision as of 16:06, 10 January 2018

Reaction PUNP7

  • direction:
    • REVERSIBLE
  • common name:
    • Purine-nucleoside phosphorylase (Xanthosine)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Phosphate[c] + 1.0 Xanthosine[c] <=> 1.0 Alpha-D-Ribose 1-phosphate[c] + 1.0 Xanthine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:XANTHOSINEPHOSPHORY-RXN
  • MetaNetX (MNX) Equation : MNXR103349
  • KEGG Reaction : R02297
  • EC Number : 2.4.2.-