Difference between revisions of "Gar"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DHQTi DHQTi] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-dehydroquinate dehydratase, irrev...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/KAS2 KAS2] == * direction: ** LEFT-TO-RIGHT * common name: ** B-ketoacyl synthetase (n-C14:0) * Syn...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/DHQTi DHQTi] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/KAS2 KAS2] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 3-dehydroquinate dehydratase, irreversible
+
** B-ketoacyl synthetase (n-C14:0)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[3dhq]][c] '''=>''' 1.0 [[h2o]][c] '''+''' 1.0 [[3dhsk]][c]
+
** 1.0 [[accoa]][c] '''+''' 17.0 [[h]][c] '''+''' 6.0 [[malcoa]][c] '''+''' 12.0 [[nadph]][c] '''=>''' 12.0 [[nadp]][c] '''+''' 1.0 [[ttdca]][c] '''+''' 6.0 [[co2]][c] '''+''' 7.0 [[coa]][c] '''+''' 5.0 [[h2o]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 3-Dehydroquinate[c] '''=>''' 1.0 H2O H2O[c] '''+''' 1.0 3-Dehydroshikimate[c]
+
** 1.0 Acetyl-CoA[c] '''+''' 17.0 H+[c] '''+''' 6.0 Malonyl CoA C24H33N7O19P3S[c] '''+''' 12.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] '''=>''' 12.0 Nicotinamide adenine dinucleotide phosphate[c] '''+''' 1.0 Tetradecanoate (n-C14:0)[c] '''+''' 6.0 CO2 CO2[c] '''+''' 7.0 Coenzyme A[c] '''+''' 5.0 H2O H2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[EF1731]]
 
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''508''' reactions found over '''2349''' reactions in the full pathway
+
** '''460''' reactions found over '''2349''' reactions in the full pathway
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
+
* [[map00780]]: [http://www.genome.jp/dbget-bin/www_bget?map00780 map00780]
−
** '''156''' reactions found over '''694''' reactions in the full pathway
+
** '''26''' reactions found over '''67''' reactions in the full pathway
−
* [[map00400]]: [http://www.genome.jp/dbget-bin/www_bget?map00400 map00400]
+
* [[map00061]]: [http://www.genome.jp/dbget-bin/www_bget?map00061 map00061]
−
** '''21''' reactions found over '''59''' reactions in the full pathway
+
** '''65''' reactions found over '''160''' reactions in the full pathway
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
+
−
** '''218''' reactions found over '''1054''' reactions in the full pathway
+
−
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
+
−
** '''83''' reactions found over '''228''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* [[gap-filling]]:
−
** [[pantograph]]:
+
** [[meneco]]:
−
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** [[added for gapfilling]]
−
*** [[l_plantarum_wcfs1]]
+
−
*** [[b_subtilis_subsp_subtilis_str168]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* MetaNetX (MNX) Equation : MNXR100917
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21096 21096]
+
* EC Number : 2.3.1.41
−
* BioCyc : META:3-DEHYDROQUINATE-DEHYDRATASE-RXN
+
−
* MetaNetX (MNX) Equation : MNXR97449
+
−
* KEGG Reaction : R03084
+
−
* EC Number : 4.2.1.10
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=3-dehydroquinate dehydratase, irreversible}}
+
{{#set: common name=B-ketoacyl synthetase (n-C14:0)}}
−
{{#set: gene associated=EF1731}}
+
{{#set: in pathway=map01100|map00780|map00061}}
−
{{#set: in pathway=map01100|map01130|map00400|map01110|map01230}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=added for gapfilling}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
+

Revision as of 16:06, 10 January 2018

Reaction KAS2

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • B-ketoacyl synthetase (n-C14:0)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Acetyl-CoA[c] + 17.0 H+[c] + 6.0 Malonyl CoA C24H33N7O19P3S[c] + 12.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] => 12.0 Nicotinamide adenine dinucleotide phosphate[c] + 1.0 Tetradecanoate (n-C14:0)[c] + 6.0 CO2 CO2[c] + 7.0 Coenzyme A[c] + 5.0 H2O H2O[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR100917
  • EC Number : 2.3.1.41




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