Difference between revisions of "Met L"

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(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/ppgpp ppgpp] == * common name: ** Guanosine 3',5'-bis(diphosphate) * Synonym(s): == Reaction...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/XAND XAND] == * direction: ** LEFT-TO-RIGHT * common name: ** Xanthine dehydrogenase * Synonym(s):...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
== Metabolite [http://bigg.ucsd.edu/universal/metabolites/ppgpp ppgpp] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/XAND XAND] ==
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* direction:
 +
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Guanosine 3',5'-bis(diphosphate)
+
** Xanthine dehydrogenase
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
* [[PPGPPDP]]
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* With identifiers:
== Reaction(s) known to produce the compound ==
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** 1.0 [[nad]][c] '''+''' 1.0 [[h2o]][c] '''+''' 1.0 [[xan]][c] '''=>''' 1.0 [[urate]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[nadh]][c]
* [[GDPDPK]]
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* With common name(s):
== Reaction(s) of unknown directionality ==
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** 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 H2O H2O[c] '''+''' 1.0 Xanthine[c] '''=>''' 1.0 Urate C5H4N4O3[c] '''+''' 1.0 H+[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[EF2571]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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* [[EF2569]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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* [[EF2570]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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== Pathways  ==
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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** '''460''' reactions found over '''2349''' reactions in the full pathway
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* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
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** '''97''' reactions found over '''298''' reactions in the full pathway
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* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
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** '''104''' reactions found over '''715''' reactions in the full pathway
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== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
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*** [[b_subtilis_subsp_subtilis_str168]]
 
== External links  ==
 
== External links  ==
{{#set: common name=Guanosine 3',5'-bis(diphosphate)}}
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* EC Number : 1.17.1.4
{{#set: consumed by=PPGPPDP}}
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* BioCyc : META:RXN0-901
{{#set: produced by=GDPDPK}}
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* MetaNetX (MNX) Equation : MNXR105225
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16669 16669]
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* Reactome : REACT_R-GGA-421158
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* KEGG Reaction : R02103
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Xanthine dehydrogenase}}
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{{#set: gene associated=EF2571|EF2569|EF2570}}
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{{#set: in pathway=map01100|map00230|map01120}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=b_subtilis_subsp_subtilis_str168}}

Revision as of 16:09, 10 January 2018

Reaction XAND

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Xanthine dehydrogenase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Nicotinamide adenine dinucleotide[c] + 1.0 H2O H2O[c] + 1.0 Xanthine[c] => 1.0 Urate C5H4N4O3[c] + 1.0 H+[c] + 1.0 Nicotinamide adenine dinucleotide - reduced[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 1.17.1.4
  • BioCyc : META:RXN0-901
  • MetaNetX (MNX) Equation : MNXR105225
  • RHEA:
  • Reactome : REACT_R-GGA-421158
  • KEGG Reaction : R02103