Difference between revisions of "DCMPDA"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/3hdecACP 3hdecACP] == * common name: ** (R)-3-Hydroxydecanoyl-[acyl-carrier protein] * Synony...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NDPK3 NDPK3] == * direction: ** REVERSIBLE * common name: ** Nucleoside-diphosphate kinase (ATP:CDP...")
Line 1: Line 1:
[[Category:Metabolite]]
+
[[Category:Reaction]]
== Metabolite [http://bigg.ucsd.edu/universal/metabolites/3hdecACP 3hdecACP] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/NDPK3 NDPK3] ==
 +
* direction:
 +
** REVERSIBLE
 
* common name:
 
* common name:
** (R)-3-Hydroxydecanoyl-[acyl-carrier protein]
+
** Nucleoside-diphosphate kinase (ATP:CDP)
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
* [[3HAD100]]
+
* With identifiers:
== Reaction(s) known to produce the compound ==
+
** 1.0 [[cdp]][c] '''+''' 1.0 [[atp]][c] '''<=>''' 1.0 [[adp]][c] '''+''' 1.0 [[ctp]][c]
== Reaction(s) of unknown directionality ==
+
* With common name(s):
* [[3OAR100]]
+
** 1.0 CDP C9H12N3O11P2[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''<=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 CTP C9H12N3O14P3[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[EF0228]]
 +
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 +
* [[EF1036]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 +
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 +
== Pathways  ==
 +
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 +
** '''82''' reactions found over '''244''' reactions in the full pathway
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''179''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 +
** '''97''' reactions found over '''298''' reactions in the full pathway
 +
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 +
** '''135''' reactions found over '''694''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[e_coli_sstr_k12_substr_mg1655]]
 +
*** [[l_plantarum_wcfs1]]
 +
*** [[b_subtilis_subsp_subtilis_str168]]
 
== External links  ==
 
== External links  ==
{{#set: common name=(R)-3-Hydroxydecanoyl-[acyl-carrier protein]}}
+
* RHEA:
{{#set: consumed by=3HAD100}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25237 25237]
{{#set: consumed or produced by=3OAR100}}
+
* BioCyc : META:CDPKIN-RXN
 +
* MetaNetX (MNX) Equation : MNXR101936
 +
* KEGG Reaction : R00570
 +
* EC Number : 2.7.4.6
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Nucleoside-diphosphate kinase (ATP:CDP)}}
 +
{{#set: gene associated=EF0228|EF1036}}
 +
{{#set: in pathway=map00240|map01100|map01110|map00230|map01130}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}

Revision as of 16:12, 10 January 2018

Reaction NDPK3

  • direction:
    • REVERSIBLE
  • common name:
    • Nucleoside-diphosphate kinase (ATP:CDP)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 CDP C9H12N3O11P2[c] + 1.0 ATP C10H12N5O13P3[c] <=> 1.0 ADP C10H12N5O10P2[c] + 1.0 CTP C9H12N3O14P3[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:CDPKIN-RXN
  • MetaNetX (MNX) Equation : MNXR101936
  • KEGG Reaction : R00570
  • EC Number : 2.7.4.6