Difference between revisions of "FMETTRS 1"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PROTS_LPL_v60 PROTS_LPL_v60] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula ==...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PUNP6 PUNP6] == * direction: ** REVERSIBLE * common name: ** Purine-nucleoside phosphorylase (Deoxy...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/PROTS_LPL_v60 PROTS_LPL_v60] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PUNP6 PUNP6] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 +
* common name:
 +
** Purine-nucleoside phosphorylase (Deoxyinosine)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 0.043 [[iletrna]][c] '''+''' 0.125 [[alatrna]][c] '''+''' 0.04 [[argtrna]][c] '''+''' 0.06 [[asptrna]][c] '''+''' 0.028 [[tyrtrna]][c] '''+''' 0.023 [[glutrna]][c] '''+''' 2.306 [[h2o]][c] '''+''' 0.04 [[protrna]][c] '''+''' 0.078 [[leutrna]][c] '''+''' 0.066 [[lystrna]][c] '''+''' 0.034 [[phetrna]][c] '''+''' 0.006 [[trptrna]][c] '''+''' 0.017 [[histrna]][c] '''+''' 0.306 [[atp]][c] '''+''' 0.064 [[thrtrna]][c] '''+''' 0.056 [[sertrna]][c] '''+''' 0.084 [[glytrna]][c] '''+''' 0.011 [[cystrna]][c] '''+''' 0.022 [[mettrna]][c] '''+''' 0.06 [[valtrna]][c] '''+''' 0.06 [[asntrna]][c] '''+''' 0.083 [[glntrna]][c] '''+''' 2.0 [[gtp]][c] '''=>''' 0.064 [[trnathr]][c] '''+''' 0.04 [[trnapro]][c] '''+''' 0.066 [[trnalys]][c] '''+''' 2.306 [[h]][c] '''+''' 0.106 [[trnaglu]][c] '''+''' 0.034 [[trnaphe]][c] '''+''' 0.006 [[trnatrp]][c] '''+''' 0.06 [[trnaasn]][c] '''+''' 0.078 [[trnaleu]][c] '''+''' 0.043 [[trnaile]][c] '''+''' 0.306 [[adp]][c] '''+''' 0.125 [[trnaala]][c] '''+''' 2.0 [[gdp]][c] '''+''' 0.06 [[trnaval]][c] '''+''' 0.001 [[PROT_LPL_v60]][c] '''+''' 0.017 [[trnahis]][c] '''+''' 0.011 [[trnacys]][c] '''+''' 0.04 [[trnaarg]][c] '''+''' 0.028 [[trnatyr]][c] '''+''' 0.056 [[trnaser]][c] '''+''' 0.084 [[trnagly]][c] '''+''' 2.306 [[pi]][c] '''+''' 0.022 [[trnamet]][c] '''+''' 0.06 [[trnaasp]][c]
+
** 1.0 [[din]][c] '''+''' 1.0 [[pi]][c] '''<=>''' 1.0 [[2dr1p]][c] '''+''' 1.0 [[hxan]][c]
 
* With common name(s):
 
* With common name(s):
−
**
+
** 1.0 Deoxyinosine[c] '''+''' 1.0 Phosphate[c] '''<=>''' 1.0 2-Deoxy-D-ribose 1-phosphate[c] '''+''' 1.0 Hypoxanthine[c]
 +
 
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[EF0187]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 +
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 +
* [[EF0186]]
 +
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 +
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 +
** '''82''' reactions found over '''244''' reactions in the full pathway
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00983]]: [http://www.genome.jp/dbget-bin/www_bget?map00983 map00983]
 +
** '''22''' reactions found over '''72''' reactions in the full pathway
 +
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 +
** '''97''' reactions found over '''298''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[manual]]:
+
* [[orthology]]:
−
** [[reaction added for biomass, from model l.plantarum]]
+
** [[pantograph]]:
 +
*** [[e_coli_sstr_k12_substr_mg1655]]
 +
*** [[l_plantarum_wcfs1]]
 +
*** [[b_subtilis_subsp_subtilis_str168]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
−
{{#set: in pathway=}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27750 27750]
−
{{#set: reconstruction category=manual}}
+
* BioCyc : META:DEOXYINOPHOSPHOR-RXN
−
{{#set: reconstruction source=reaction added for biomass, from model l.plantarum}}
+
* MetaNetX (MNX) Equation : MNXR103348
 +
* KEGG Reaction : R02748
 +
* EC Number : 2.4.2.1
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Purine-nucleoside phosphorylase (Deoxyinosine)}}
 +
{{#set: gene associated=EF0187|EF0186}}
 +
{{#set: in pathway=map00240|map01100|map00983|map00230}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}

Revision as of 17:12, 10 January 2018

Reaction PUNP6

  • direction:
    • REVERSIBLE
  • common name:
    • Purine-nucleoside phosphorylase (Deoxyinosine)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Deoxyinosine[c] + 1.0 Phosphate[c] <=> 1.0 2-Deoxy-D-ribose 1-phosphate[c] + 1.0 Hypoxanthine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:DEOXYINOPHOSPHOR-RXN
  • MetaNetX (MNX) Equation : MNXR103348
  • KEGG Reaction : R02748
  • EC Number : 2.4.2.1




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