Difference between revisions of "CITt12"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/XPPT XPPT] == * direction: ** LEFT-TO-RIGHT * common name: ** Xanthine phosphoribosyltransferase *...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TDPDRR TDPDRR] == * direction: ** LEFT-TO-RIGHT * common name: ** DTDP-4-dehydrorhamnose reductase...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/XPPT XPPT] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/TDPDRR TDPDRR] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Xanthine phosphoribosyltransferase
+
** DTDP-4-dehydrorhamnose reductase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[xan]][c] '''+''' 1.0 [[prpp]][c] '''=>''' 1.0 [[xmp]][c] '''+''' 1.0 [[ppi]][c]
+
** 1.0 [[h]][c] '''+''' 1.0 [[dtdp4d6dm]][c] '''+''' 1.0 [[nadph]][c] '''=>''' 1.0 [[nadp]][c] '''+''' 1.0 [[dtdprmn]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Xanthine[c] '''+''' 1.0 5-Phospho-alpha-D-ribose 1-diphosphate[c] '''=>''' 1.0 Xanthosine 5'-phosphate[c] '''+''' 1.0 Diphosphate[c]
+
** 1.0 H+[c] '''+''' 1.0 DTDP-4-dehydro-6-deoxy-L-mannose[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] '''=>''' 1.0 Nicotinamide adenine dinucleotide phosphate[c] '''+''' 1.0 DTDP-L-rhamnose[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF2365]]
+
* [[EF2191]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
+
* [[map00521]]: [http://www.genome.jp/dbget-bin/www_bget?map00521 map00521]
−
** '''508''' reactions found over '''2349''' reactions in the full pathway
+
** '''7''' reactions found over '''14''' reactions in the full pathway
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
+
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
−
** '''218''' reactions found over '''1054''' reactions in the full pathway
+
** '''135''' reactions found over '''694''' reactions in the full pathway
−
* [[map00983]]: [http://www.genome.jp/dbget-bin/www_bget?map00983 map00983]
+
* [[map00523]]: [http://www.genome.jp/dbget-bin/www_bget?map00523 map00523]
−
** '''22''' reactions found over '''72''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
+
−
** '''98''' reactions found over '''298''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
 +
*** [[e_coli_sstr_k12_substr_mg1655]]
 
*** [[l_plantarum_wcfs1]]
 
*** [[l_plantarum_wcfs1]]
−
*** [[b_subtilis_subsp_subtilis_str168]]
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10800 10800]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21796 21796]
−
* BioCyc : META:XANPRIBOSYLTRAN-RXN
+
* BioCyc : META:DTDPDEHYRHAMREDUCT-RXN
−
* MetaNetX (MNX) Equation : MNXR105243
+
* MetaNetX (MNX) Equation : MNXR104760
−
* KEGG Reaction : R02142
+
* KEGG Reaction : R02777
−
* EC Number : 2.4.2.22
+
* EC Number : 1.1.1.133
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Xanthine phosphoribosyltransferase}}
+
{{#set: common name=DTDP-4-dehydrorhamnose reductase}}
−
{{#set: gene associated=EF2365}}
+
{{#set: gene associated=EF2191}}
−
{{#set: in pathway=map01100|map01110|map00983|map00230}}
+
{{#set: in pathway=map00521|map01130|map00523}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
+
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1}}

Revision as of 17:13, 10 January 2018

Reaction TDPDRR

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • DTDP-4-dehydrorhamnose reductase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H+[c] + 1.0 DTDP-4-dehydro-6-deoxy-L-mannose[c] + 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] => 1.0 Nicotinamide adenine dinucleotide phosphate[c] + 1.0 DTDP-L-rhamnose[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:DTDPDEHYRHAMREDUCT-RXN
  • MetaNetX (MNX) Equation : MNXR104760
  • KEGG Reaction : R02777
  • EC Number : 1.1.1.133




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