Difference between revisions of "PYK"
From metabolic_network
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/12ppd__R 12ppd__R] == * common name: ** (R)-Propane-1,2-diol * Synonym(s): == Reaction(s) kn...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ALAALAr ALAALAr] == * direction: ** REVERSIBLE * common name: ** D-alanine-D-alanine ligase (revers...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/ALAALAr ALAALAr] == |
| + | * direction: | ||
| + | ** REVERSIBLE | ||
* common name: | * common name: | ||
| − | ** | + | ** D-alanine-D-alanine ligase (reversible) |
* Synonym(s): | * Synonym(s): | ||
| − | == Reaction(s) | + | == Reaction Formula == |
| − | == | + | * With identifiers: |
| − | * [[ | + | ** 2.0 [[ala__D]][c] '''+''' 1.0 [[atp]][c] '''<=>''' 1.0 [[pi]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[alaala]][c] '''+''' 1.0 [[adp]][c] |
| − | == | + | * With common name(s): |
| + | ** 2.0 D-Alanine[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''<=>''' 1.0 Phosphate[c] '''+''' 1.0 H+[c] '''+''' 1.0 D-Alanyl-D-alanine[c] '''+''' 1.0 ADP C10H12N5O10P2[c] | ||
| + | |||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * [[EF0843]] | ||
| + | ** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]] | ||
| + | ** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]] | ||
| + | == Pathways == | ||
| + | * [[map00473]]: [http://www.genome.jp/dbget-bin/www_bget?map00473 map00473] | ||
| + | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | ||
| + | ** '''460''' reactions found over '''2349''' reactions in the full pathway | ||
| + | * [[map00550]]: [http://www.genome.jp/dbget-bin/www_bget?map00550 map00550] | ||
| + | ** '''10''' reactions found over '''27''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * [[orthology]]: | ||
| + | ** [[pantograph]]: | ||
| + | *** [[e_coli_sstr_k12_substr_mg1655]] | ||
| + | *** [[b_subtilis_subsp_subtilis_str168]] | ||
== External links == | == External links == | ||
| − | {{#set: common name= | + | * RHEA: |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11224 11224] |
| + | * BioCyc : META:DALADALALIG-RXN | ||
| + | * MetaNetX (MNX) Equation : MNXR95678 | ||
| + | * KEGG Reaction : R01150 | ||
| + | * EC Number : 6.3.2.4 | ||
| + | {{#set: direction=REVERSIBLE}} | ||
| + | {{#set: common name=D-alanine-D-alanine ligase (reversible)}} | ||
| + | {{#set: gene associated=EF0843}} | ||
| + | {{#set: in pathway=map00473|map01100|map00550}} | ||
| + | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction tool=pantograph}} | ||
| + | {{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|b_subtilis_subsp_subtilis_str168}} | ||
Revision as of 16:14, 10 January 2018
Contents
Reaction ALAALAr
- direction:
- REVERSIBLE
- common name:
- D-alanine-D-alanine ligase (reversible)
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 2.0 D-Alanine[c] + 1.0 ATP C10H12N5O13P3[c] <=> 1.0 Phosphate[c] + 1.0 H+[c] + 1.0 D-Alanyl-D-alanine[c] + 1.0 ADP C10H12N5O10P2[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
Pathways
- map00473: map00473
- 2 reactions found over 3 reactions in the full pathway
- map01100: map01100
- 460 reactions found over 2349 reactions in the full pathway
- map00550: map00550
- 10 reactions found over 27 reactions in the full pathway
Reconstruction information
External links
- RHEA:
- BioCyc : META:DALADALALIG-RXN
- MetaNetX (MNX) Equation : MNXR95678
- KEGG Reaction : R01150
- EC Number : 6.3.2.4
