Difference between revisions of "TransportSeed paps"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ALDD18 ALDD18] == * direction: ** LEFT-TO-RIGHT * common name: ** Aldehyde dehydrogenase octadecan...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/SPMDOX SPMDOX] == * direction: ** LEFT-TO-RIGHT * common name: ** Spermidine:(acceptor) oxidoreduct...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/ALDD18 ALDD18] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/SPMDOX SPMDOX] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Aldehyde dehydrogenase  octadecanal  NAD
+
** Spermidine:(acceptor) oxidoreductase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[h2o]][c] '''+''' 1.0 [[ocdcal]][c] '''+''' 1.0 [[nad]][c] '''=>''' 1.0 [[nadh]][c] '''+''' 1.0 [[ocdca]][c] '''+''' 2.0 [[h]][c]
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** 1.0 [[o2]][c] '''+''' 1.0 [[h2o]][c] '''+''' 1.0 [[spmd]][c] '''=>''' 1.0 [[4abutn]][c] '''+''' 1.0 [[h2o2]][c] '''+''' 1.0 [[13dampp]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 H2O H2O[c] '''+''' 1.0 Octadecanal C18H36O[c] '''+''' 1.0 Nicotinamide adenine dinucleotide[c] '''=>''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 1.0 Octadecanoate (n-C18:0)[c] '''+''' 2.0 H+[c]
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** 1.0 O2 O2[c] '''+''' 1.0 H2O H2O[c] '''+''' 1.0 Spermidine[c] '''=>''' 1.0 4-Aminobutanal[c] '''+''' 1.0 Hydrogen peroxide[c] '''+''' 1.0 1 3 Diaminopropane C3H12N2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[EF0253]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
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* [[gap-filling]]:
** [[pantograph]]:
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** [[meneco]]:
*** [[b_subtilis_subsp_subtilis_str168]]
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*** [[added for gapfilling]]
 
== External links  ==
 
== External links  ==
* RHEA:
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* MetaNetX (MNX) Equation : MNXR104481
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=44020 44020]
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* MetaNetX (MNX) Equation : MNXR95741
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{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Aldehyde dehydrogenase  octadecanal  NAD }}
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{{#set: common name=Spermidine:(acceptor) oxidoreductase}}
{{#set: gene associated=EF0253}}
+
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
{{#set: reconstruction category=orthology}}
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{{#set: reconstruction category=gap-filling}}
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=meneco}}
{{#set: reconstruction source=b_subtilis_subsp_subtilis_str168}}
+
{{#set: reconstruction source=added for gapfilling}}

Revision as of 16:17, 10 January 2018

Reaction SPMDOX

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Spermidine:(acceptor) oxidoreductase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 O2 O2[c] + 1.0 H2O H2O[c] + 1.0 Spermidine[c] => 1.0 4-Aminobutanal[c] + 1.0 Hydrogen peroxide[c] + 1.0 1 3 Diaminopropane C3H12N2[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR104481