Difference between revisions of "TDPGDH"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/SUCBZL SUCBZL] == * direction: ** LEFT-TO-RIGHT * common name: ** O-succinylbenzoate-CoA ligase * S...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ARBTpts ARBTpts] == * direction: ** LEFT-TO-RIGHT * common name: ** Arbutin transport via PEPPyr PT...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/SUCBZL SUCBZL] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/ARBTpts ARBTpts] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** O-succinylbenzoate-CoA ligase
+
** Arbutin transport via PEPPyr PTS
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[coa]][c] '''+''' 1.0 [[sucbz]][c] '''+''' 1.0 [[atp]][c] '''=>''' 1.0 [[sbzcoa]][c] '''+''' 1.0 [[ppi]][c] '''+''' 1.0 [[amp]][c]
+
** 1.0 [[pep]][c] '''+''' 1.0 [[arbt]][e] '''=>''' 1.0 [[arbt6p]][c] '''+''' 1.0 [[pyr]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 Coenzyme A[c] '''+''' 1.0 O-Succinylbenzoate[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''=>''' 1.0 O-Succinylbenzoyl-CoA[c] '''+''' 1.0 Diphosphate[c] '''+''' 1.0 AMP C10H12N5O7P[c]
+
** 1.0 Phosphoenolpyruvate[c] '''+''' 1.0 Arbutin C12H16O7[e] '''=>''' 1.0 Arbutin 6-phosphate[c] '''+''' 1.0 Pyruvate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF0446]]
+
* [[EF0709]]
 +
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 +
* [[EF0270]]
 +
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 +
* [[EF0710]]
 +
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 +
* [[EF2598]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''508''' reactions found over '''2349''' reactions in the full pathway
 
* [[map00130]]: [http://www.genome.jp/dbget-bin/www_bget?map00130 map00130]
 
** '''9''' reactions found over '''40''' reactions in the full pathway
 
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
** '''218''' reactions found over '''1054''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17009 17009]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34943 34943]
* BioCyc : META:O-SUCCINYLBENZOATE-COA-LIG-RXN
+
* MetaNetX (MNX) Equation : MNXR95932
* MetaNetX (MNX) Equation : MNXR104612
+
* KEGG Reaction : R04030
+
* EC Number : 6.2.1.26
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=O-succinylbenzoate-CoA ligase}}
+
{{#set: common name=Arbutin transport via PEPPyr PTS}}
{{#set: gene associated=EF0446}}
+
{{#set: gene associated=EF0709|EF0270|EF0710|EF2598}}
{{#set: in pathway=map01100|map00130|map01110}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction source=b_subtilis_subsp_subtilis_str168}}
 
{{#set: reconstruction source=b_subtilis_subsp_subtilis_str168}}

Revision as of 16:17, 10 January 2018

Reaction ARBTpts

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Arbutin transport via PEPPyr PTS
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Phosphoenolpyruvate[c] + 1.0 Arbutin C12H16O7[e] => 1.0 Arbutin 6-phosphate[c] + 1.0 Pyruvate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR95932