Difference between revisions of "EGMEACPR"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/SPMS SPMS] == * direction: ** LEFT-TO-RIGHT * common name: ** Spermidine synthase * Synonym(s): ==...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NTP3 NTP3] == * direction: ** LEFT-TO-RIGHT * common name: ** Nucleoside-triphosphatase (GTP) * Syn...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/SPMS SPMS] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/NTP3 NTP3] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Spermidine synthase
+
** Nucleoside-triphosphatase (GTP)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[ametam]][c] '''+''' 1.0 [[ptrc]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[spmd]][c] '''+''' 1.0 [[5mta]][c]
+
** 1.0 [[gtp]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[gdp]][c] '''+''' 1.0 [[pi]][c] '''+''' 1.0 [[h]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 S-Adenosylmethioninamine[c] '''+''' 1.0 Putrescine[c] '''=>''' 1.0 H+[c] '''+''' 1.0 Spermidine[c] '''+''' 1.0 5-Methylthioadenosine[c]
+
** 1.0 GTP C10H12N5O14P3[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 GDP C10H12N5O11P2[c] '''+''' 1.0 Phosphate[c] '''+''' 1.0 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[EF3119]]
 +
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
== Pathways  ==
 
== Pathways  ==
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
+
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
** '''508''' reactions found over '''2349''' reactions in the full pathway
+
** '''97''' reactions found over '''298''' reactions in the full pathway
* [[map00270]]: [http://www.genome.jp/dbget-bin/www_bget?map00270 map00270]
+
** '''25''' reactions found over '''135''' reactions in the full pathway
+
* [[map00480]]: [http://www.genome.jp/dbget-bin/www_bget?map00480 map00480]
+
** '''11''' reactions found over '''39''' reactions in the full pathway
+
* [[map00330]]: [http://www.genome.jp/dbget-bin/www_bget?map00330 map00330]
+
** '''24''' reactions found over '''149''' reactions in the full pathway
+
* [[map00410]]: [http://www.genome.jp/dbget-bin/www_bget?map00410 map00410]
+
** '''8''' reactions found over '''91''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[gap-filling]]:
+
* [[orthology]]:
** [[meneco]]:
+
** [[pantograph]]:
*** [[added for gapfilling]]
+
*** [[e_coli_sstr_k12_substr_mg1655]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12721 12721]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19669 19669]
* EC Number : 2.5.1.16
+
* BioCyc : META:RXN0-5462
* MetaNetX (MNX) Equation : MNXR95860
+
* MetaNetX (MNX) Equation : MNXR102043
* KEGG Reaction : R01920
+
* KEGG Reaction : R00335
* BioCyc : META:SPERMIDINESYN-RXN
+
* EC Number : 3.6.1.15
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Spermidine synthase}}
+
{{#set: common name=Nucleoside-triphosphatase (GTP)}}
{{#set: in pathway=map01100|map00270|map00480|map00330|map00410}}
+
{{#set: gene associated=EF3119}}
{{#set: reconstruction category=gap-filling}}
+
{{#set: in pathway=map00230}}
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction source=added for gapfilling}}
+
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655}}

Revision as of 17:18, 10 January 2018

Reaction NTP3

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Nucleoside-triphosphatase (GTP)
  • Synonym(s):

Reaction Formula

  • With identifiers:
    • 1.0 gtp[c] + 1.0 h2o[c] => 1.0 gdp[c] + 1.0 pi[c] + 1.0 h[c]
  • With common name(s):
    • 1.0 GTP C10H12N5O14P3[c] + 1.0 H2O H2O[c] => 1.0 GDP C10H12N5O11P2[c] + 1.0 Phosphate[c] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:RXN0-5462
  • MetaNetX (MNX) Equation : MNXR102043
  • KEGG Reaction : R00335
  • EC Number : 3.6.1.15