Difference between revisions of "Map01051"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/METSR_S1 METSR_S1] == * direction: ** LEFT-TO-RIGHT * common name: ** L methionine S oxide reductas...")
(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00300 map00300] == * common_name: ** Lysine biosynthesis * Synonym(s): == Reaction(s) found == ''...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/METSR_S1 METSR_S1] ==
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00300 map00300] ==
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* direction:
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* common_name:
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** LEFT-TO-RIGHT
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** Lysine biosynthesis
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* common name:
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** L methionine S oxide reductase  trdrd
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''13''' reactions found over '''34''' reactions in the full pathway
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** 1.0 [[metox]][c] '''+''' 1.0 [[trdrd]][c] '''=>''' 1.0 [[trdox]][c] '''+''' 1.0 [[met__L]][c] '''+''' 1.0 [[h2o]][c]
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* [[AASAD3]]
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* With common name(s):
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** 0 associated gene:
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** 1.0 L Methionine S oxide C5H11NO3S[c] '''+''' 1.0 Reduced thioredoxin[c] '''=>''' 1.0 Oxidized thioredoxin[c] '''+''' 1.0 L-Methionine[c] '''+''' 1.0 H2O H2O[c]
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** 1 reconstruction source(s) associated:
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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== Genes associated with this reaction  ==
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* [[ASAD]]
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Genes have been associated with this reaction based on different elements listed below.
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** 1 associated gene(s):
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* [[EF1681]]
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*** [[EF1183]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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** 2 reconstruction source(s) associated:
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== Pathways  ==
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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== Reconstruction information  ==
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*** [[orthology-l_plantarum_wcfs1]]
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* [[orthology]]:
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* [[ASPK]]
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** [[pantograph]]:
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** 1 associated gene(s):
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*** [[b_subtilis_subsp_subtilis_str168]]
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*** [[EF0368]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-l_plantarum_wcfs1]]
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* [[DAPDC]]
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** 1 associated gene(s):
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*** [[EF1504]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-l_plantarum_wcfs1]]
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* [[DAPE]]
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** 1 associated gene(s):
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*** [[EF0464]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-l_plantarum_wcfs1]]
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* [[HSDy]]
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** 2 associated gene(s):
 +
*** [[EF0368]]
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*** [[EF2422]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-l_plantarum_wcfs1]]
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* [[SACCD1]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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* [[SACCD2]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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* [[SDPDS]]
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** 1 associated gene(s):
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*** [[EF3178]]
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** 3 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-l_plantarum_wcfs1]]
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* [[THDPS]]
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** 1 associated gene(s):
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*** [[EF1133]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[orthology-l_plantarum_wcfs1]]
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* [[THPAT]]
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** 1 associated gene(s):
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*** [[EF1133]]
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** 1 reconstruction source(s) associated:
 +
*** [[orthology-l_plantarum_wcfs1]]
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* [[UAAGDS]]
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** 1 associated gene(s):
 +
*** [[EF0668]]
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** 3 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** [[orthology-l_plantarum_wcfs1]]
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* [[UGMDDS]]
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** 1 associated gene(s):
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*** [[EF0845]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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== Reaction(s) not found ==
 +
* [http://bigg.ucsd.edu/universal/reactions/AASAD2 AASAD2]
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* [http://bigg.ucsd.edu/universal/reactions/AASAD3m AASAD3m]
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* [http://bigg.ucsd.edu/universal/reactions/AATA AATA]
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* [http://bigg.ucsd.edu/universal/reactions/ADAPAT ADAPAT]
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* [http://bigg.ucsd.edu/universal/reactions/ARAT ARAT]
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* [http://bigg.ucsd.edu/universal/reactions/ASADH ASADH]
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* [http://bigg.ucsd.edu/universal/reactions/ASPK_1 ASPK_1]
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* [http://bigg.ucsd.edu/universal/reactions/CH2ACH CH2ACH]
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* [http://bigg.ucsd.edu/universal/reactions/CH3ACH CH3ACH]
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* [http://bigg.ucsd.edu/universal/reactions/DAPDA DAPDA]
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* [http://bigg.ucsd.edu/universal/reactions/HICITDm HICITDm]
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* [http://bigg.ucsd.edu/universal/reactions/HSDH HSDH]
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* [http://bigg.ucsd.edu/universal/reactions/HSDxi HSDxi]
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* [http://bigg.ucsd.edu/universal/reactions/LDAPAT LDAPAT]
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* [http://bigg.ucsd.edu/universal/reactions/OXAGm OXAGm]
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* [http://bigg.ucsd.edu/universal/reactions/RH2CD RH2CD]
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* [http://bigg.ucsd.edu/universal/reactions/RH3CD RH3CD]
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* [http://bigg.ucsd.edu/universal/reactions/SACCD4m SACCD4m]
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* [http://bigg.ucsd.edu/universal/reactions/SDPTA SDPTA]
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* [http://bigg.ucsd.edu/universal/reactions/UGLDDS1 UGLDDS1]
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* [http://bigg.ucsd.edu/universal/reactions/UGLDDS2 UGLDDS2]
 
== External links  ==
 
== External links  ==
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* BioCyc : META:1.8.4.13-RXN
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{{#set: common_name=Lysine biosynthesis}}
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* MetaNetX (MNX) Equation : MNXR101484
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{{#set: reaction found=13}}
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* KEGG Reaction : R02025
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{{#set: total reaction=34}}
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* EC Number : 1.8.4.11
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{{#set: completion rate=38.0}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=L methionine S oxide reductase  trdrd }}
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{{#set: gene associated=EF1681}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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−
{{#set: reconstruction tool=pantograph}}
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−
{{#set: reconstruction source=b_subtilis_subsp_subtilis_str168}}
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Revision as of 17:53, 18 March 2018

Pathway map00300

  • common_name:
    • Lysine biosynthesis
  • Synonym(s):

Reaction(s) found

13 reactions found over 34 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/efaecV583/index.php?title=Map01051&oldid=5759"