Difference between revisions of "5mtr"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/HXAND HXAND] == * direction: ** LEFT-TO-RIGHT * common name: ** Hypoxanthine dehydrogenase * Synony...")
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/fum fum] == * common name: ** Fumarate * Synonym(s): == Reaction(s) known to consume the com...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/HXAND HXAND] ==
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== Metabolite [http://bigg.ucsd.edu/universal/metabolites/fum fum] ==
* direction:
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** LEFT-TO-RIGHT
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* common name:
 
* common name:
** Hypoxanthine dehydrogenase
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** Fumarate
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
* With identifiers:
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* [[FUMt2_2]]
** 1.0 [[nad]][c] '''+''' 1.0 [[hxan]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[xan]][c] '''+''' 1.0 [[nadh]][c]
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* [[FUMt2_3]]
* With common name(s):
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* [[ASPO5]]
** 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 Hypoxanthine[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 H+[c] '''+''' 1.0 Xanthine[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c]
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== Reaction(s) known to produce the compound ==
 
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* [[FUMt2_2]]
== Genes associated with this reaction  ==
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* [[FUMt2_3]]
Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) of unknown directionality ==
* [[EF2569]]
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* [[SUCFUMt]]
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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* [[ADSL2r]]
* [[EF2571]]
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* [[ADSL1r]]
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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* [[FUMt2r]]
* [[EF2570]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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== Pathways  ==
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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** '''460''' reactions found over '''2349''' reactions in the full pathway
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* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
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** '''97''' reactions found over '''298''' reactions in the full pathway
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* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
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** '''104''' reactions found over '''715''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[b_subtilis_subsp_subtilis_str168]]
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== External links  ==
 
== External links  ==
* EC Number : 1.17.1.4
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{{#set: common name=Fumarate}}
* BioCyc : META:RXN-7682
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{{#set: consumed by=FUMt2_2|FUMt2_3|ASPO5}}
* MetaNetX (MNX) Equation : MNXR100747
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{{#set: produced by=FUMt2_2|FUMt2_3}}
* RHEA:
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{{#set: reversible reaction associated=SUCFUMt|ADSL2r|ADSL1r|FUMt2r}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24670 24670]
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* Reactome : REACT_R-GGA-421161
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* KEGG Reaction : R01768
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Hypoxanthine dehydrogenase}}
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{{#set: gene associated=EF2569|EF2571|EF2570}}
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{{#set: in pathway=map01100|map00230|map01120}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=b_subtilis_subsp_subtilis_str168}}
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Revision as of 19:14, 18 March 2018

Metabolite fum

  • common name:
    • Fumarate
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links