Difference between revisions of "DcaACP"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CTBTabc CTBTabc] == * direction: ** LEFT-TO-RIGHT * common name: ** Crotonobetaine transport in via...")
(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00730 map00730] == * common_name: ** Thiamine metabolism * Synonym(s): == Reaction(s) found == ''...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/CTBTabc CTBTabc] ==
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00730 map00730] ==
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* direction:
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* common_name:
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** LEFT-TO-RIGHT
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** Thiamine metabolism
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* common name:
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** Crotonobetaine transport in via ABC system
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''11''' reactions found over '''24''' reactions in the full pathway
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** 1.0 [[h2o]][c] '''+''' 1.0 [[ctbt]][e] '''+''' 1.0 [[atp]][c] '''=>''' 1.0 [[adp]][c] '''+''' 1.0 [[ctbt]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[pi]][c]
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* [[ADK1]]
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* With common name(s):
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** 1 associated gene(s):
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** 1.0 H2O H2O[c] '''+''' 1.0 Crotonobetaine[e] '''+''' 1.0 ATP C10H12N5O13P3[c] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 Crotonobetaine[c] '''+''' 1.0 H+[c] '''+''' 1.0 Phosphate[c]
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*** [[EF0228]]
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** 3 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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* [[EF0863]]
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*** [[orthology-l_plantarum_wcfs1]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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* [[ADK2]]
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* [[EF0862]]
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** 1 associated gene(s):
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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*** [[EF0228]]
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* [[EF0865]]
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** 2 reconstruction source(s) associated:
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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* [[EF0864]]
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*** [[orthology-l_plantarum_wcfs1]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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* [[DADK]]
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== Pathways  ==
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** 1 associated gene(s):
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== Reconstruction information  ==
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*** [[EF0228]]
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* [[orthology]]:
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** 2 reconstruction source(s) associated:
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** [[pantograph]]:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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* [[DXPS]]
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** 2 associated gene(s):
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*** [[EF1354]]
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*** [[EF1659]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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* [[HETZK]]
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** 1 associated gene(s):
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*** [[EF2777]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-l_plantarum_wcfs1]]
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* [[HMPK1]]
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** 2 associated gene(s):
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*** [[EF0202]]
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*** [[EF2775]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-l_plantarum_wcfs1]]
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* [[PMPK]]
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** 2 associated gene(s):
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*** [[EF2775]]
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*** [[EF0202]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-l_plantarum_wcfs1]]
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* [[TDP]]
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** 1 associated gene(s):
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*** [[EF1595]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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* [[TMDPK]]
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** 1 associated gene(s):
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*** [[EF3117]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-l_plantarum_wcfs1]]
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* [[TMN]]
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** 1 associated gene(s):
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*** [[EF2767]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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* [[TMPPP]]
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** 1 associated gene(s):
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*** [[EF2776]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-l_plantarum_wcfs1]]
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== Reaction(s) not found ==
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* [http://bigg.ucsd.edu/universal/reactions/ADK1m ADK1m]
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* [http://bigg.ucsd.edu/universal/reactions/ATAMh ATAMh]
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* [http://bigg.ucsd.edu/universal/reactions/ATDAMh ATDAMh]
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* [http://bigg.ucsd.edu/universal/reactions/ATDAMm ATDAMm]
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* [http://bigg.ucsd.edu/universal/reactions/DXS DXS]
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* [http://bigg.ucsd.edu/universal/reactions/TDPm TDPm]
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* [http://bigg.ucsd.edu/universal/reactions/THMP THMP]
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* [http://bigg.ucsd.edu/universal/reactions/THMPe THMPe]
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* [http://bigg.ucsd.edu/universal/reactions/THMTP THMTP]
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* [http://bigg.ucsd.edu/universal/reactions/TMDPPK TMDPPK]
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* [http://bigg.ucsd.edu/universal/reactions/TMK TMK]
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* [http://bigg.ucsd.edu/universal/reactions/TMPK TMPK]
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* [http://bigg.ucsd.edu/universal/reactions/TYRL TYRL]
 
== External links  ==
 
== External links  ==
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* MetaNetX (MNX) Equation : MNXR96938
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{{#set: common_name=Thiamine metabolism}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction found=11}}
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{{#set: common name=Crotonobetaine transport in via ABC system}}
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{{#set: total reaction=24}}
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{{#set: gene associated=EF0863|EF0862|EF0865|EF0864}}
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{{#set: completion rate=46.0}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=b_subtilis_subsp_subtilis_str168}}
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Revision as of 19:27, 18 March 2018

Pathway map00730

  • common_name:
    • Thiamine metabolism
  • Synonym(s):

Reaction(s) found

11 reactions found over 24 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/efaecV583/index.php?title=DcaACP&oldid=7265"