Difference between revisions of "Thm"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TRSARr TRSARr] == * direction: ** REVERSIBLE * common name: ** Tartronate semialdehyde reductase *...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/MALt2_2 MALt2_2] == * direction: ** LEFT-TO-RIGHT * common name: ** Malate transport via proton sym...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/TRSARr TRSARr] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/MALt2_2 MALt2_2] ==
 
* direction:
 
* direction:
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Tartronate semialdehyde reductase
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** Malate transport via proton symport (2 H)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[h]][c] '''+''' 1.0 [[2h3oppan]][c] '''+''' 1.0 [[nadh]][c] '''<=>''' 1.0 [[glyc__R]][c] '''+''' 1.0 [[nad]][c]
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** 2.0 [[h]][e] '''+''' 1.0 [[mal__L]][e] '''=>''' 2.0 [[h]][c] '''+''' 1.0 [[mal__L]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 H+[c] '''+''' 1.0 2-Hydroxy-3-oxopropanoate[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''<=>''' 1.0 (R)-Glycerate[c] '''+''' 1.0 Nicotinamide adenine dinucleotide[c]
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** 2.0 H+[e] '''+''' 1.0 L-Malate[e] '''=>''' 2.0 H+[c] '''+''' 1.0 L-Malate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF2889]]
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* [[EF0387]]
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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** 2_reaction_to_add_delete
 
== Pathways  ==
 
== Pathways  ==
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
* [[map00630]]: [http://www.genome.jp/dbget-bin/www_bget?map00630 map00630]
 
** '''21''' reactions found over '''129''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
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* Category: [[manual]]
** [[pantograph]]:
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** Source: [[manual-2_reaction_to_add_delete]]
*** [[e_coli_sstr_k12_substr_mg1655]]
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*** Comment: [[this was a reaction occurring in the perisplasm of e. coli]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18845 18845]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29339 29339]
* BioCyc : META:RXN0-5289
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* MetaNetX (MNX) Equation : MNXR101370
* MetaNetX (MNX) Equation : MNXR100682
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* BioCyc : META:TRANS-RXN-121A
* KEGG Reaction : R01745
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{{#set: direction=LEFT-TO-RIGHT}}
* EC Number : 1.1.1
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{{#set: common name=Malate transport via proton symport (2 H)}}
{{#set: direction=REVERSIBLE}}
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{{#set: gene associated=EF0387}}
{{#set: common name=Tartronate semialdehyde reductase}}
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{{#set: in pathway=}}
{{#set: gene associated=EF2889}}
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{{#set: reconstruction category=manual}}
{{#set: in pathway=map01100|map00630}}
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{{#set: reconstruction source=manual-2_reaction_to_add_delete}}
{{#set: reconstruction category=orthology}}
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{{#set: reconstruction comment=this was a reaction occurring in the perisplasm of e. coli}}
{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655}}
+

Revision as of 19:33, 18 March 2018

Reaction MALt2_2

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Malate transport via proton symport (2 H)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 2.0 H+[e] + 1.0 L-Malate[e] => 2.0 H+[c] + 1.0 L-Malate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

  • EF0387
    • 2_reaction_to_add_delete

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR101370
  • BioCyc : META:TRANS-RXN-121A