Difference between revisions of "TransportSeed orot"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/SALCS SALCS] == * direction: ** LEFT-TO-RIGHT * common name: ** SALCS * Synonym(s): == Reaction Fo...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/XYLI1 XYLI1] == * direction: ** REVERSIBLE * common name: ** Xylose isomerase * Synonym(s): == Rea...") |
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| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://bigg.ucsd.edu/universal/reactions/ | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/XYLI1 XYLI1] == |
* direction: | * direction: | ||
| − | ** | + | ** REVERSIBLE |
* common name: | * common name: | ||
| − | ** | + | ** Xylose isomerase |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1.0 [[ | + | ** 1.0 [[xyl__D]][c] '''<=>''' 1.0 [[xylu__D]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1.0 | + | ** 1.0 D-Xylose[c] '''<=>''' 1.0 D-Xylulose[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * [[EF0556]] | ||
| + | ** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]] | ||
| + | ** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]] | ||
== Pathways == | == Pathways == | ||
| + | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | ||
| + | ** '''460''' reactions found over '''2349''' reactions in the full pathway | ||
| + | * [[map00040]]: [http://www.genome.jp/dbget-bin/www_bget?map00040 map00040] | ||
| + | ** '''15''' reactions found over '''54''' reactions in the full pathway | ||
| + | * [[map00051]]: [http://www.genome.jp/dbget-bin/www_bget?map00051 map00051] | ||
| + | ** '''22''' reactions found over '''63''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[ | + | * Category: [[orthology]] |
| − | ** [[ | + | ** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]] |
| − | *** [[ | + | *** Tool: [[pantograph]] |
| + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] | ||
| + | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
| − | * MetaNetX (MNX) Equation : | + | * RHEA: |
| − | * KEGG Reaction : | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22816 22816] |
| − | {{#set: direction= | + | * BioCyc : META:XYLISOM-RXN |
| − | {{#set: common name= | + | * MetaNetX (MNX) Equation : MNXR105253 |
| − | {{#set: in pathway=}} | + | * KEGG Reaction : R01432 |
| − | {{#set: reconstruction category= | + | * EC Number : 5.3.1.5 |
| − | {{#set: reconstruction | + | {{#set: direction=REVERSIBLE}} |
| − | {{#set: reconstruction | + | {{#set: common name=Xylose isomerase}} |
| + | {{#set: gene associated=EF0556}} | ||
| + | {{#set: in pathway=map01100|map00040|map00051}} | ||
| + | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168}} | ||
| + | {{#set: reconstruction tool=pantograph}} | ||
Revision as of 18:33, 18 March 2018
Contents
Reaction XYLI1
- direction:
- REVERSIBLE
- common name:
- Xylose isomerase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 D-Xylose[c] <=> 1.0 D-Xylulose[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
Pathways
- map01100: map01100
- 460 reactions found over 2349 reactions in the full pathway
- map00040: map00040
- 15 reactions found over 54 reactions in the full pathway
- map00051: map00051
- 22 reactions found over 63 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-e_coli_sstr_k12_substr_mg1655
- Tool: pantograph
- Source: orthology-b_subtilis_subsp_subtilis_str168
- Tool: pantograph
- Source: orthology-e_coli_sstr_k12_substr_mg1655
External links
- RHEA:
- BioCyc : META:XYLISOM-RXN
- MetaNetX (MNX) Equation : MNXR105253
- KEGG Reaction : R01432
- EC Number : 5.3.1.5
