Difference between revisions of "EF0903"

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(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/co2 co2] == * common name: ** CO2 CO2 * Synonym(s): == Reaction(s) known to consume the comp...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ACONTa ACONTa] == * direction: ** REVERSIBLE * common name: ** Aconitase (half-reaction A, Citrate...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://bigg.ucsd.edu/universal/metabolites/co2 co2] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/ACONTa ACONTa] ==
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* direction:
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** REVERSIBLE
 
* common name:
 
* common name:
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** CO2 CO2
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** Aconitase (half-reaction A, Citrate hydro-lyase)
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[AIRC1]]
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* With identifiers:
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* [[EX_co2]]
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** 1.0 [[cit]][c] '''<=>''' 1.0 [[h2o]][c] '''+''' 1.0 [[acon_C]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[CPPPGO]]
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** 1.0 Citrate[c] '''<=>''' 1.0 H2O H2O[c] '''+''' 1.0 Cis-Aconitate[c]
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* [[GND]]
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* [[OIVD2]]
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== Genes associated with this reaction  ==
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* [[3OAS140]]
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== Pathways  ==
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* [[PPCDC]]
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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* [[CSPMDDC]]
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** '''460''' reactions found over '''2349''' reactions in the full pathway
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* [[MCMAT4_manual]]
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* [[map00630]]: [http://www.genome.jp/dbget-bin/www_bget?map00630 map00630]
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* [[DXPS]]
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** '''21''' reactions found over '''129''' reactions in the full pathway
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* [[ME1]]
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* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
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* [[DPMVD]]
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** '''179''' reactions found over '''1054''' reactions in the full pathway
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* [[ME2]]
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* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
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* [[GLUDC]]
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** '''104''' reactions found over '''715''' reactions in the full pathway
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* [[TYRCBOX]]
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* [[map01210]]: [http://www.genome.jp/dbget-bin/www_bget?map01210 map01210]
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* [[FAS100]]
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** '''14''' reactions found over '''80''' reactions in the full pathway
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* [[ADMDC]]
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* [[map00720]]: [http://www.genome.jp/dbget-bin/www_bget?map00720 map00720]
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* [[PPNDH]]
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** '''14''' reactions found over '''157''' reactions in the full pathway
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* [[POX]]
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* [[map00020]]: [http://www.genome.jp/dbget-bin/www_bget?map00020 map00020]
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* [[OAADC]]
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** '''4''' reactions found over '''70''' reactions in the full pathway
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* [[FAS120]]
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* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
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* [[KAS2]]
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** '''135''' reactions found over '''694''' reactions in the full pathway
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* [[OIVD3]]
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== Reconstruction information  ==
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* [[KG6PDC]]
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* Category: [[gap-filling]]
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* [[OGMEACPS]]
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** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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* [[PPND]]
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*** Tool: [[meneco]]
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* [[ORNDC]]
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**** Comment: [[added for gapfilling]]
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* [[FAS140]]
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* [[FAS80_L]]
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* [[KAS15]]
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* [[KAS14]]
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* [[KAS17]]
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* [[OXGDC]]
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* [[KAS13]]
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* [[3OAS100]]
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* [[3OAS80]]
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* [[3OAS160]]
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* [[PDH]]
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* [[ACHBS]]
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* [[3OAS120]]
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* [[3OAS60]]
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* [[ASP1DC]]
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* [[DAPDC]]
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* [[ACLDC]]
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* [[GLXCL]]
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* [[MCMAT7_manual]]
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* [[ALLTAMH]]
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* [[MCMAT8_manual]]
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* [[ACLS]]
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* [[3OAS180]]
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* [[3OAS181]]
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* [[OMPDC]]
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* [[DHNAOT4]]
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* [[DHNAOT7]]
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* [[SEPHCHCS]]
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== Reaction(s) of unknown directionality ==
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* [[AIRCr]]
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* [[CO2t]]
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* [[OIVD1r]]
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* [[2S6HCCi]]
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* [[CBMKr]]
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* [[HCO3E]]
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== External links  ==
 
== External links  ==
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{{#set: common name=CO2 CO2}}
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* RHEA:
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{{#set: consumed by=AIRC1|EX_co2}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10228 10228]
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{{#set: produced by=CPPPGO|GND|OIVD2|3OAS140|PPCDC|CSPMDDC|MCMAT4_manual|DXPS|ME1|DPMVD|ME2|GLUDC|TYRCBOX|FAS100|ADMDC|PPNDH|POX|OAADC|FAS120|KAS2|OIVD3|KG6PDC|OGMEACPS|PPND|ORNDC|FAS140|FAS80_L|KAS15|KAS14|KAS17|OXGDC|KAS13|3OAS100|3OAS80|3OAS160|PDH|ACHBS|3OAS120|3OAS60|ASP1DC|DAPDC|ACLDC|GLXCL|MCMAT7_manual|ALLTAMH|MCMAT8_manual|ACLS|3OAS180|3OAS181|OMPDC|DHNAOT4|DHNAOT7|SEPHCHCS}}
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* EC Number : 4.2.1.3
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{{#set: consumed or produced by=AIRCr|CO2t|OIVD1r|2S6HCCi|CBMKr|HCO3E}}
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* MetaNetX (MNX) Equation : MNXR95386
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* KEGG Reaction : R01325
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* BioCyc : META:ACONITATEDEHYDR-RXN
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Aconitase (half-reaction A, Citrate hydro-lyase)}}
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{{#set: in pathway=map01100|map00630|map01110|map01120|map01210|map00720|map00020|map01130}}
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{{#set: reconstruction category=gap-filling}}
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{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
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{{#set: reconstruction tool=meneco}}
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{{#set: reconstruction comment=added for gapfilling}}

Revision as of 18:33, 18 March 2018

Reaction ACONTa

  • direction:
    • REVERSIBLE
  • common name:
    • Aconitase (half-reaction A, Citrate hydro-lyase)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Citrate[c] <=> 1.0 H2O H2O[c] + 1.0 Cis-Aconitate[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 4.2.1.3
  • MetaNetX (MNX) Equation : MNXR95386
  • KEGG Reaction : R01325
  • BioCyc : META:ACONITATEDEHYDR-RXN




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