Difference between revisions of "ORNDC"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NOX2 NOX2] == * direction: ** LEFT-TO-RIGHT * common name: ** NADH oxidase H2O forming * Synonym(s...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PTRCabc PTRCabc] == * direction: ** LEFT-TO-RIGHT * common name: ** Putrescine transport via ABC sy...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/NOX2 NOX2] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PTRCabc PTRCabc] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** NADH oxidase H2O forming
+
** Putrescine transport via ABC system
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 2.0 [[nadh]][c] '''+''' 2.0 [[h]][c] '''+''' 1.0 [[o2]][c] '''=>''' 2.0 [[nad]][c] '''+''' 2.0 [[h2o]][c]
+
** 1.0 [[atp]][c] '''+''' 1.0 [[ptrc]][e] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[adp]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[ptrc]][c] '''+''' 1.0 [[pi]][c]
 
* With common name(s):
 
* With common name(s):
** 2.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 2.0 H+[c] '''+''' 1.0 O2 O2[c] '''=>''' 2.0 Nicotinamide adenine dinucleotide[c] '''+''' 2.0 H2O H2O[c]
+
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 Putrescine[e] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 H+[c] '''+''' 1.0 Putrescine[c] '''+''' 1.0 Phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF2989]]
+
* [[EF2649]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
* [[EF1586]]
+
* [[EF2650]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
* [[EF2651]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
* [[EF2652]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[orthology]]
** [[pantograph]]:
+
** Source: [[orthology-l_plantarum_wcfs1]]
*** [[l_plantarum_wcfs1]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29995#1 29995#1]
 +
* MetaNetX (MNX) Equation : MNXR103338
 +
* EC Number : 3.6.3.31
 +
* BioCyc : META:ABC-25-RXN
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=NADH oxidase H2O forming }}
+
{{#set: common name=Putrescine transport via ABC system}}
{{#set: gene associated=EF2989|EF1586}}
+
{{#set: gene associated=EF2649|EF2650|EF2651|EF2652}}
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-l_plantarum_wcfs1}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=l_plantarum_wcfs1}}
 

Revision as of 19:34, 18 March 2018

Reaction PTRCabc

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Putrescine transport via ABC system
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 ATP C10H12N5O13P3[c] + 1.0 Putrescine[e] + 1.0 H2O H2O[c] => 1.0 ADP C10H12N5O10P2[c] + 1.0 H+[c] + 1.0 Putrescine[c] + 1.0 Phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR103338
  • EC Number : 3.6.3.31
  • BioCyc : META:ABC-25-RXN