Difference between revisions of "MPTAT"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CYSTRS CYSTRS] == * direction: ** LEFT-TO-RIGHT * common name: ** Cysteinyl-tRNA synthetase * Synon...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/RHC RHC] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With identifiers:...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/CYSTRS CYSTRS] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/RHC RHC] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** Cysteinyl-tRNA synthetase
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[atp]][c] '''+''' 1.0 [[cys__L]][c] '''+''' 1.0 [[trnacys]][c] '''=>''' 1.0 [[amp]][c] '''+''' 1.0 [[cystrna]][c] '''+''' 1.0 [[ppi]][c]
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** 1.0 [[h2o]][c] '''+''' 1.0 [[rhcys]][c] '''=>''' 1.0 [[hcys__L]][c] '''+''' 1.0 [[rib__D]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 L-Cysteine[c] '''+''' 1.0 TRNA(Cys)[c] '''=>''' 1.0 AMP C10H12N5O7P[c] '''+''' 1.0 L-Cysteinyl-tRNA(Cys)[c] '''+''' 1.0 Diphosphate[c]
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** 1.0 H2O H2O[c] '''+''' 1.0 S-Ribosyl-L-homocysteine[c] '''=>''' 1.0 L-Homocysteine[c] '''+''' 1.0 D-Ribose[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[EF0045]]
 
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
 
== Pathways  ==
 
== Pathways  ==
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* [[map00970]]: [http://www.genome.jp/dbget-bin/www_bget?map00970 map00970]
 
−
** '''23''' reactions found over '''49''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
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* Category: [[manual]]
−
** [[pantograph]]:
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** Source: [[manual-1_new_rxn_for_biomass]]
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*** [[e_coli_sstr_k12_substr_mg1655]]
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*** Comment: [[reaction added for biomass, from model l.plantarum]]
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*** [[l_plantarum_wcfs1]]
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== External links  ==
 
== External links  ==
−
* Reactome : REACT_R-HSA-379887
 
−
* MetaNetX (MNX) Equation : MNXR97018
 
−
* KEGG Reaction : R03650
 
−
* EC Number : 6.1.1.15
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Cysteinyl-tRNA synthetase}}
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{{#set: in pathway=}}
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{{#set: gene associated=EF0045}}
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{{#set: reconstruction category=manual}}
−
{{#set: in pathway=map00970}}
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{{#set: reconstruction source=manual-1_new_rxn_for_biomass}}
−
{{#set: reconstruction category=orthology}}
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{{#set: reconstruction comment=reaction added for biomass, from model l.plantarum}}
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1}}
+

Revision as of 19:35, 18 March 2018

Reaction RHC

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H2O H2O[c] + 1.0 S-Ribosyl-L-homocysteine[c] => 1.0 L-Homocysteine[c] + 1.0 D-Ribose[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/efaecV583/index.php?title=MPTAT&oldid=7600"