Difference between revisions of "AIRC2"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GLYCTO1 GLYCTO1] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycolate oxidase * Synonym(s):...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/BZDH BZDH] == * direction: ** REVERSIBLE * common name: ** Benzaldehyde dehydrogenase * Synonym(s):...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/GLYCTO1 GLYCTO1] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/BZDH BZDH] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** Glycolate oxidase
+
** Benzaldehyde dehydrogenase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[o2]][c] '''+''' 1.0 [[glyclt]][c] '''=>''' 1.0 [[h2o2]][c] '''+''' 1.0 [[glx]][c]
+
** 1.0 [[nad]][c] '''+''' 1.0 [[bzal]][c] '''+''' 1.0 [[h2o]][c] '''<=>''' 1.0 [[nadh]][c] '''+''' 2.0 [[h]][c] '''+''' 1.0 [[bz]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 O2 O2[c] '''+''' 1.0 Glycolate C2H3O3[c] '''=>''' 1.0 Hydrogen peroxide[c] '''+''' 1.0 Glyoxylate[c]
+
** 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 Benzaldehyde[c] '''+''' 1.0 H2O H2O[c] '''<=>''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 2.0 H+[c] '''+''' 1.0 Benzoate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Line 17: Line 17:
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
−
* [[map00630]]: [http://www.genome.jp/dbget-bin/www_bget?map00630 map00630]
+
* [[map01220]]: [http://www.genome.jp/dbget-bin/www_bget?map01220 map01220]
−
** '''21''' reactions found over '''129''' reactions in the full pathway
+
** '''2''' reactions found over '''60''' reactions in the full pathway
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
+
−
** '''179''' reactions found over '''1054''' reactions in the full pathway
+
 
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 
** '''104''' reactions found over '''715''' reactions in the full pathway
 
** '''104''' reactions found over '''715''' reactions in the full pathway
−
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
+
* [[map00627]]: [http://www.genome.jp/dbget-bin/www_bget?map00627 map00627]
−
** '''45''' reactions found over '''220''' reactions in the full pathway
+
** '''2''' reactions found over '''42''' reactions in the full pathway
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
+
* [[map00622]]: [http://www.genome.jp/dbget-bin/www_bget?map00622 map00622]
−
** '''135''' reactions found over '''694''' reactions in the full pathway
+
** '''2''' reactions found over '''32''' reactions in the full pathway
 +
* [[map00623]]: [http://www.genome.jp/dbget-bin/www_bget?map00623 map00623]
 +
** '''1''' reactions found over '''51''' reactions in the full pathway
 +
* [[map00350]]: [http://www.genome.jp/dbget-bin/www_bget?map00350 map00350]
 +
** '''9''' reactions found over '''102''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[gap-filling]]:
+
* Category: [[gap-filling]]
−
** [[meneco]]:
+
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
−
*** [[added for gapfilling]]
+
*** Tool: [[meneco]]
 +
**** Comment: [[added for gapfilling]]
 
== External links  ==
 
== External links  ==
−
* EC Number : 1.1.3.15
 
−
* BioCyc : META:RXN-969
 
−
* MetaNetX (MNX) Equation : MNXR100338
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25311 25311]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11840 11840]
−
* Reactome : REACT_R-ATH-389842
+
* EC Number : 1.2.1.28
−
* KEGG Reaction : R00475
+
* MetaNetX (MNX) Equation : MNXR96365
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* KEGG Reaction : R01419
−
{{#set: common name=Glycolate oxidase}}
+
* BioCyc : META:BENZALDEHYDE-DEHYDROGENASE-NAD+-RXN
−
{{#set: in pathway=map01100|map00630|map01110|map01120|map01200|map01130}}
+
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Benzaldehyde dehydrogenase}}
 +
{{#set: in pathway=map01100|map01220|map01120|map00627|map00622|map00623|map00350}}
 
{{#set: reconstruction category=gap-filling}}
 
{{#set: reconstruction category=gap-filling}}
 +
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
 
{{#set: reconstruction tool=meneco}}
 
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction source=added for gapfilling}}
+
{{#set: reconstruction comment=added for gapfilling}}

Revision as of 19:37, 18 March 2018

Reaction BZDH

  • direction:
    • REVERSIBLE
  • common name:
    • Benzaldehyde dehydrogenase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Nicotinamide adenine dinucleotide[c] + 1.0 Benzaldehyde[c] + 1.0 H2O H2O[c] <=> 1.0 Nicotinamide adenine dinucleotide - reduced[c] + 2.0 H+[c] + 1.0 Benzoate[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 1.2.1.28
  • MetaNetX (MNX) Equation : MNXR96365
  • KEGG Reaction : R01419
  • BioCyc : META:BENZALDEHYDE-DEHYDROGENASE-NAD+-RXN




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