Difference between revisions of "2dhp"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/URIK3 URIK3] == * direction: ** LEFT-TO-RIGHT * common name: ** Uridine kinase (ITP:Uridine) * Syno...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DURIPP DURIPP] == * direction: ** REVERSIBLE * common name: ** Deoxyuridine phosphorylase * Synonym...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://bigg.ucsd.edu/universal/reactions/ | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/DURIPP DURIPP] == |
* direction: | * direction: | ||
| − | ** | + | ** REVERSIBLE |
* common name: | * common name: | ||
| − | ** | + | ** Deoxyuridine phosphorylase |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1.0 [[ | + | ** 1.0 [[duri]][c] '''+''' 1.0 [[pi]][c] '''<=>''' 1.0 [[2dr1p]][c] '''+''' 1.0 [[ura]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1.0 | + | ** 1.0 Deoxyuridine[c] '''+''' 1.0 Phosphate[c] '''<=>''' 1.0 2-Deoxy-D-ribose 1-phosphate[c] '''+''' 1.0 Uracil[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * [[EF0173]] |
| − | ** [[pantograph]]-[[ | + | ** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]] |
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]] | ** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]] | ||
| + | * [[EF0187]] | ||
| + | ** [[pantograph]]-[[l_plantarum_wcfs1]] | ||
| + | ** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]] | ||
== Pathways == | == Pathways == | ||
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | ||
| Line 26: | Line 29: | ||
** '''22''' reactions found over '''72''' reactions in the full pathway | ** '''22''' reactions found over '''72''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[orthology]]: | + | * Category: [[orthology]] |
| − | ** [[pantograph]]: | + | ** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]] |
| − | *** [[l_plantarum_wcfs1]] | + | *** Tool: [[pantograph]] |
| − | *** [[ | + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] |
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-l_plantarum_wcfs1]] | ||
| + | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
| − | * MetaNetX (MNX) Equation : | + | * RHEA: |
| − | * KEGG Reaction : | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22824 22824] |
| − | * EC Number : 2. | + | * BioCyc : META:URA-PHOSPH-RXN |
| − | {{#set: direction= | + | * MetaNetX (MNX) Equation : MNXR97818 |
| − | {{#set: common name= | + | * KEGG Reaction : R02484 |
| − | {{#set: gene associated= | + | * EC Number : 2.4.2.1 |
| + | {{#set: direction=REVERSIBLE}} | ||
| + | {{#set: common name=Deoxyuridine phosphorylase}} | ||
| + | {{#set: gene associated=EF0173|EF0187}} | ||
{{#set: in pathway=map01100|map00240|map00983}} | {{#set: in pathway=map01100|map00240|map00983}} | ||
{{#set: reconstruction category=orthology}} | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}} | ||
{{#set: reconstruction tool=pantograph}} | {{#set: reconstruction tool=pantograph}} | ||
| − | |||
Revision as of 19:37, 18 March 2018
Contents
Reaction DURIPP
- direction:
- REVERSIBLE
- common name:
- Deoxyuridine phosphorylase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 Deoxyuridine[c] + 1.0 Phosphate[c] <=> 1.0 2-Deoxy-D-ribose 1-phosphate[c] + 1.0 Uracil[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
Pathways
- map01100: map01100
- 460 reactions found over 2349 reactions in the full pathway
- map00240: map00240
- 82 reactions found over 244 reactions in the full pathway
- map00983: map00983
- 22 reactions found over 72 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-e_coli_sstr_k12_substr_mg1655
- Tool: pantograph
- Source: orthology-b_subtilis_subsp_subtilis_str168
- Tool: pantograph
- Source: orthology-l_plantarum_wcfs1
- Tool: pantograph
- Source: orthology-e_coli_sstr_k12_substr_mg1655
External links
- RHEA:
- BioCyc : META:URA-PHOSPH-RXN
- MetaNetX (MNX) Equation : MNXR97818
- KEGG Reaction : R02484
- EC Number : 2.4.2.1
