Difference between revisions of "Pro L"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GF6PTA GF6PTA] == * direction: ** LEFT-TO-RIGHT * common name: ** Glutamine-fructose-6-phosphate tr...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/SACCD1 SACCD1] == * direction: ** REVERSIBLE * common name: ** Saccharopine dehydrogenase NADP L...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/GF6PTA GF6PTA] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/SACCD1 SACCD1] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** Glutamine-fructose-6-phosphate transaminase
+
** Saccharopine dehydrogenase  NADP  L glutamate forming
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[gln__L]][c] '''+''' 1.0 [[f6p]][c] '''=>''' 1.0 [[glu__L]][c] '''+''' 1.0 [[gam6p]][c]
+
** 1.0 [[glu__L]][c] '''+''' 1.0 [[L2aadp6sa]][c] '''+''' 1.0 [[nadph]][c] '''+''' 1.0 [[h]][c] '''<=>''' 1.0 [[saccrp__L]][c] '''+''' 1.0 [[h2o]][c] '''+''' 1.0 [[nadp]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 L-Glutamine[c] '''+''' 1.0 D-Fructose 6-phosphate[c] '''=>''' 1.0 L-Glutamate[c] '''+''' 1.0 D-Glucosamine 6-phosphate[c]
+
** 1.0 L-Glutamate[c] '''+''' 1.0 L 2 Aminoadipate 6 semialdehyde C6H11NO3[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] '''+''' 1.0 H+[c] '''<=>''' 1.0 L Saccharopine C11H19N2O6[c] '''+''' 1.0 H2O H2O[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[EF2151]]
 
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
−
* [[map00520]]: [http://www.genome.jp/dbget-bin/www_bget?map00520 map00520]
+
* [[map00310]]: [http://www.genome.jp/dbget-bin/www_bget?map00310 map00310]
−
** '''24''' reactions found over '''80''' reactions in the full pathway
+
** '''6''' reactions found over '''138''' reactions in the full pathway
−
* [[map00250]]: [http://www.genome.jp/dbget-bin/www_bget?map00250 map00250]
+
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
−
** '''22''' reactions found over '''93''' reactions in the full pathway
+
** '''179''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map00300]]: [http://www.genome.jp/dbget-bin/www_bget?map00300 map00300]
 +
** '''13''' reactions found over '''34''' reactions in the full pathway
 +
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 +
** '''56''' reactions found over '''228''' reactions in the full pathway
 
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
** '''135''' reactions found over '''694''' reactions in the full pathway
 
** '''135''' reactions found over '''694''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[gap-filling]]
−
** [[pantograph]]:
+
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
−
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[meneco]]
−
*** [[l_plantarum_wcfs1]]
+
**** Comment: [[added for gapfilling]]
−
*** [[b_subtilis_subsp_subtilis_str168]]
+
 
== External links  ==
 
== External links  ==
−
* MetaNetX (MNX) Equation : MNXR100107
+
* RHEA:
−
* EC Number : 2.6.1.16
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10020 10020]
−
* BioCyc : META:L-GLN-FRUCT-6-P-AMINOTRANS-RXN
+
* EC Number : 1.5.1.10
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* MetaNetX (MNX) Equation : MNXR104236
−
{{#set: common name=Glutamine-fructose-6-phosphate transaminase}}
+
* KEGG Reaction : R02315
−
{{#set: gene associated=EF2151}}
+
* BioCyc : META:RXN3O-127
−
{{#set: in pathway=map01100|map00520|map00250|map01130}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: common name=Saccharopine dehydrogenase  NADP  L glutamate forming }}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: in pathway=map01100|map00310|map01110|map00300|map01230|map01130}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
+
{{#set: reconstruction category=gap-filling}}
 +
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
 +
{{#set: reconstruction tool=meneco}}
 +
{{#set: reconstruction comment=added for gapfilling}}

Revision as of 18:38, 18 March 2018

Reaction SACCD1

  • direction:
    • REVERSIBLE
  • common name:
    • Saccharopine dehydrogenase NADP L glutamate forming
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 L-Glutamate[c] + 1.0 L 2 Aminoadipate 6 semialdehyde C6H11NO3[c] + 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] + 1.0 H+[c] <=> 1.0 L Saccharopine C11H19N2O6[c] + 1.0 H2O H2O[c] + 1.0 Nicotinamide adenine dinucleotide phosphate[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 1.5.1.10
  • MetaNetX (MNX) Equation : MNXR104236
  • KEGG Reaction : R02315
  • BioCyc : META:RXN3O-127




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