Difference between revisions of "HIBD manual"
From metabolic_network
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/cmp cmp] == * common name: ** CMP C9H12N3O8P * Synonym(s): == Reaction(s) known to consume t...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CYSTRS CYSTRS] == * direction: ** LEFT-TO-RIGHT * common name: ** Cysteinyl-tRNA synthetase * Synon...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/CYSTRS CYSTRS] == |
| + | * direction: | ||
| + | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** Cysteinyl-tRNA synthetase |
* Synonym(s): | * Synonym(s): | ||
| − | == Reaction | + | == Reaction Formula == |
| − | * | + | * With identifiers: |
| − | * [[ | + | ** 1.0 [[atp]][c] '''+''' 1.0 [[trnacys]][c] '''+''' 1.0 [[cys__L]][c] '''=>''' 1.0 [[amp]][c] '''+''' 1.0 [[ppi]][c] '''+''' 1.0 [[cystrna]][c] |
| − | + | * With common name(s): | |
| − | + | ** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 TRNA(Cys)[c] '''+''' 1.0 L-Cysteine[c] '''=>''' 1.0 AMP C10H12N5O7P[c] '''+''' 1.0 Diphosphate[c] '''+''' 1.0 L-Cysteinyl-tRNA(Cys)[c] | |
| − | + | ||
| − | + | == Genes associated with this reaction == | |
| − | + | Genes have been associated with this reaction based on different elements listed below. | |
| − | + | * [[EF0045]] | |
| − | + | ** [[pantograph]]-[[l_plantarum_wcfs1]] | |
| − | + | ** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]] | |
| − | + | == Pathways == | |
| − | * [[ | + | * [[map00970]]: [http://www.genome.jp/dbget-bin/www_bget?map00970 map00970] |
| − | + | ** '''23''' reactions found over '''49''' reactions in the full pathway | |
| − | * [[ | + | == Reconstruction information == |
| − | * [[ | + | * Category: [[orthology]] |
| − | + | ** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]] | |
| − | * [[ | + | *** Tool: [[pantograph]] |
| − | + | ** Source: [[orthology-l_plantarum_wcfs1]] | |
| − | * [[ | + | *** Tool: [[pantograph]] |
| − | * [[ | + | |
| − | * [[ | + | |
| − | * [[ | + | |
| − | + | ||
| − | * [[ | + | |
| − | * [[ | + | |
== External links == | == External links == | ||
| − | {{#set: common name= | + | * Reactome : REACT_R-HSA-379887 |
| − | {{#set: | + | * MetaNetX (MNX) Equation : MNXR97018 |
| − | {{#set: | + | * KEGG Reaction : R03650 |
| − | {{#set: | + | * EC Number : 6.1.1.15 |
| + | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: common name=Cysteinyl-tRNA synthetase}} | ||
| + | {{#set: gene associated=EF0045}} | ||
| + | {{#set: in pathway=map00970}} | ||
| + | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-l_plantarum_wcfs1}} | ||
| + | {{#set: reconstruction tool=pantograph}} | ||
Revision as of 19:39, 18 March 2018
Contents
Reaction CYSTRS
- direction:
- LEFT-TO-RIGHT
- common name:
- Cysteinyl-tRNA synthetase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 ATP C10H12N5O13P3[c] + 1.0 TRNA(Cys)[c] + 1.0 L-Cysteine[c] => 1.0 AMP C10H12N5O7P[c] + 1.0 Diphosphate[c] + 1.0 L-Cysteinyl-tRNA(Cys)[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-e_coli_sstr_k12_substr_mg1655
- Tool: pantograph
- Source: orthology-l_plantarum_wcfs1
- Tool: pantograph
- Source: orthology-e_coli_sstr_k12_substr_mg1655
External links
- Reactome : REACT_R-HSA-379887
- MetaNetX (MNX) Equation : MNXR97018
- KEGG Reaction : R03650
- EC Number : 6.1.1.15
