Difference between revisions of "GmeACP"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/I2FE2SR I2FE2SR] == * direction: ** LEFT-TO-RIGHT * common name: ** ISC [2Fe-2S] regeneration * Syn...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PPNCL2 PPNCL2] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphopantothenate-cysteine liga...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/I2FE2SR I2FE2SR] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PPNCL2 PPNCL2] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** ISC [2Fe-2S] regeneration
+
** Phosphopantothenate-cysteine ligase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[iscssh]][c] '''+''' 1.0 [[2fe1s]][c] '''+''' 1.0 [[iscu]][c] '''=>''' 4.0 [[h]][c] '''+''' 1.0 [[iscs]][c] '''+''' 1.0 [[iscu_2fe2s]][c]
+
** 1.0 [[ctp]][c] '''+''' 1.0 [[cys__L]][c] '''+''' 1.0 [[4ppan]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[ppi]][c] '''+''' 1.0 [[4ppcys]][c] '''+''' 1.0 [[cmp]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 IscS with bound sulfur[c] '''+''' 1.0 [2Fe-1S] desulfurated iron-sulfur cluster[c] '''+''' 1.0 IscU scaffold protein[c] '''=>''' 4.0 H+[c] '''+''' 1.0 IscS sulfur acceptor protein[c] '''+''' 1.0 IscU with bound [2Fe-2S] cluster[c]
+
** 1.0 CTP C9H12N3O14P3[c] '''+''' 1.0 L-Cysteine[c] '''+''' 1.0 D-4'-Phosphopantothenate[c] '''=>''' 1.0 H+[c] '''+''' 1.0 Diphosphate[c] '''+''' 1.0 N-((R)-4-Phosphopantothenoyl)-L-cysteine[c] '''+''' 1.0 CMP C9H12N3O8P[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF2072]]
+
* [[EF2656]]
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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* [[EF2391]]
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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* [[EF0371]]
+
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00770]]: [http://www.genome.jp/dbget-bin/www_bget?map00770 map00770]
 +
** '''17''' reactions found over '''75''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[orthology]]
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
* MetaNetX (MNX) Equation : MNXR100766
+
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19397 19397]
 +
* BioCyc : META:P-PANTOCYSLIG-RXN
 +
* MetaNetX (MNX) Equation : MNXR103119
 +
* KEGG Reaction : R04231
 +
* EC Number : 6.3.2.5
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=ISC [2Fe-2S] regeneration}}
+
{{#set: common name=Phosphopantothenate-cysteine ligase}}
{{#set: gene associated=EF2072|EF2391|EF0371}}
+
{{#set: gene associated=EF2656}}
{{#set: in pathway=}}
+
{{#set: in pathway=map01100|map00770}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655}}
 

Revision as of 19:40, 18 March 2018

Reaction PPNCL2

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Phosphopantothenate-cysteine ligase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 CTP C9H12N3O14P3[c] + 1.0 L-Cysteine[c] + 1.0 D-4'-Phosphopantothenate[c] => 1.0 H+[c] + 1.0 Diphosphate[c] + 1.0 N-((R)-4-Phosphopantothenoyl)-L-cysteine[c] + 1.0 CMP C9H12N3O8P[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:P-PANTOCYSLIG-RXN
  • MetaNetX (MNX) Equation : MNXR103119
  • KEGG Reaction : R04231
  • EC Number : 6.3.2.5