Difference between revisions of "Uracp"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DDPGALA DDPGALA] == * direction: ** REVERSIBLE * common name: ** 2-dehydro-3-deoxy-6-phosphogalacto...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DHFR DHFR] == * direction: ** REVERSIBLE * common name: ** Dihydrofolate reductase * Synonym(s): =...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/DDPGALA DDPGALA] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/DHFR DHFR] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 
* common name:
 
* common name:
−
** 2-dehydro-3-deoxy-6-phosphogalactonate aldolase
+
** Dihydrofolate reductase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[2dh3dgal6p]][c] '''<=>''' 1.0 [[pyr]][c] '''+''' 1.0 [[g3p]][c]
+
** 1.0 [[h]][c] '''+''' 1.0 [[dhf]][c] '''+''' 1.0 [[nadph]][c] '''<=>''' 1.0 [[thf]][c] '''+''' 1.0 [[nadp]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 2-Dehydro-3-deoxy-D-galactonate 6-phosphate[c] '''<=>''' 1.0 Pyruvate[c] '''+''' 1.0 Glyceraldehyde 3-phosphate[c]
+
** 1.0 H+[c] '''+''' 1.0 7,8-Dihydrofolate[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] '''<=>''' 1.0 5,6,7,8-Tetrahydrofolate[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF2266]]
+
* [[EF1577]]
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
** [[pantograph]]-[[l_plantarum_wcfs1]]
−
* [[EF0423]]
+
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 +
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
−
* [[map00030]]: [http://www.genome.jp/dbget-bin/www_bget?map00030 map00030]
+
* [[map00670]]: [http://www.genome.jp/dbget-bin/www_bget?map00670 map00670]
−
** '''26''' reactions found over '''69''' reactions in the full pathway
+
** '''14''' reactions found over '''65''' reactions in the full pathway
−
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
+
* [[map00790]]: [http://www.genome.jp/dbget-bin/www_bget?map00790 map00790]
−
** '''104''' reactions found over '''715''' reactions in the full pathway
+
** '''12''' reactions found over '''41''' reactions in the full pathway
−
* [[map00052]]: [http://www.genome.jp/dbget-bin/www_bget?map00052 map00052]
+
−
** '''17''' reactions found over '''67''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24464 24464]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15009 15009]
−
* BioCyc : META:DEHYDDEOXPHOSGALACT-ALDOL-RXN
+
* Reactome : REACT_R-BTA-197972
−
* MetaNetX (MNX) Equation : MNXR97220
+
* MetaNetX (MNX) Equation : MNXR97401
−
* KEGG Reaction : R01064
+
* KEGG Reaction : R00939
−
* EC Number : 4.1.2.21
+
* EC Number : 1.5.1.3
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=2-dehydro-3-deoxy-6-phosphogalactonate aldolase}}
+
{{#set: common name=Dihydrofolate reductase}}
−
{{#set: gene associated=EF2266|EF0423}}
+
{{#set: gene associated=EF1577}}
−
{{#set: in pathway=map01100|map00030|map01120|map00052}}
+
{{#set: in pathway=map01100|map00670|map00790}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655}}
 

Revision as of 19:41, 18 March 2018

Reaction DHFR

  • direction:
    • REVERSIBLE
  • common name:
    • Dihydrofolate reductase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H+[c] + 1.0 7,8-Dihydrofolate[c] + 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] <=> 1.0 5,6,7,8-Tetrahydrofolate[c] + 1.0 Nicotinamide adenine dinucleotide phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • Reactome : REACT_R-BTA-197972
  • MetaNetX (MNX) Equation : MNXR97401
  • KEGG Reaction : R00939
  • EC Number : 1.5.1.3




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