Difference between revisions of "Ura"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TMDK2 TMDK2] == * direction: ** LEFT-TO-RIGHT * common name: ** Thymidine kinase GTPThymidine * Sy...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NADK NADK] == * direction: ** LEFT-TO-RIGHT * common name: ** NAD kinase * Synonym(s): == Reaction...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/TMDK2 TMDK2] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/NADK NADK] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Thymidine kinase GTPThymidine
+
** NAD kinase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[thymd]][c] '''+''' 1.0 [[gtp]][c] '''=>''' 1.0 [[dtmp]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[gdp]][c]
+
** 1.0 [[atp]][c] '''+''' 1.0 [[nad]][c] '''=>''' 1.0 [[nadp]][c] '''+''' 1.0 [[adp]][c] '''+''' 1.0 [[h]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 Thymidine C10H14N2O5[c] '''+''' 1.0 GTP C10H12N5O14P3[c] '''=>''' 1.0 DTMP C10H13N2O8P[c] '''+''' 1.0 H+[c] '''+''' 1.0 GDP C10H12N5O11P2[c]
+
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 Nicotinamide adenine dinucleotide[c] '''=>''' 1.0 Nicotinamide adenine dinucleotide phosphate[c] '''+''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF2555]]
+
* [[EF2670]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 +
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00760]]: [http://www.genome.jp/dbget-bin/www_bget?map00760 map00760]
 +
** '''19''' reactions found over '''97''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[orthology]]
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
*** [[l_plantarum_wcfs1]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* EC Number : 2.7.1.23
 +
* BioCyc : META:NAD-KIN-RXN
 +
* MetaNetX (MNX) Equation : MNXR101882
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18629 18629]
 +
* Reactome : REACT_R-ATH-197198
 +
* KEGG Reaction : R00104
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Thymidine kinase GTPThymidine }}
+
{{#set: common name=NAD kinase}}
{{#set: gene associated=EF2555}}
+
{{#set: gene associated=EF2670}}
{{#set: in pathway=}}
+
{{#set: in pathway=map01100|map00760}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=l_plantarum_wcfs1}}
 

Revision as of 19:41, 18 March 2018

Reaction NADK

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • NAD kinase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 ATP C10H12N5O13P3[c] + 1.0 Nicotinamide adenine dinucleotide[c] => 1.0 Nicotinamide adenine dinucleotide phosphate[c] + 1.0 ADP C10H12N5O10P2[c] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 2.7.1.23
  • BioCyc : META:NAD-KIN-RXN
  • MetaNetX (MNX) Equation : MNXR101882
  • RHEA:
  • Reactome : REACT_R-ATH-197198
  • KEGG Reaction : R00104