Difference between revisions of "Tym"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/MG2abc MG2abc] == * direction: ** LEFT-TO-RIGHT * common name: ** Magnesium transport via ABC syste...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/3AMACHYD 3AMACHYD] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-aminoacrylate hydrolase * S...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/MG2abc MG2abc] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/3AMACHYD 3AMACHYD] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Magnesium transport via ABC system
+
** 3-aminoacrylate hydrolase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[mg2]][e] '''+''' 1.0 [[atp]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[mg2]][c] '''+''' 1.0 [[pi]][c] '''+''' 1.0 [[adp]][c]
+
** 1.0 [[3amac]][c] '''+''' 1.0 [[h2o]][c] '''+''' 1.0 [[h]][c] '''=>''' 1.0 [[msa]][c] '''+''' 1.0 [[nh4]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 Magnesium[e] '''+''' 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 H+[c] '''+''' 1.0 Magnesium[c] '''+''' 1.0 Phosphate[c] '''+''' 1.0 ADP C10H12N5O10P2[c]
+
** 1.0 3-Aminoacrylate[c] '''+''' 1.0 H2O H2O[c] '''+''' 1.0 H+[c] '''=>''' 1.0 Malonate semialdehyde[c] '''+''' 1.0 Ammonium[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF1352]]
+
* [[EF1028]]
** MANUAL
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
* [[EF1304]]
+
** MANUAL
+
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[manual]]:
+
* Category: [[orthology]]
** [[this was a reaction occurring in the perisplasm of e. coli]]
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10260#1 10260#1]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34947 34947]
* MetaNetX (MNX) Equation : MNXR101505
+
* BioCyc : META:RXN0-6452
* EC Number : 3.6.3.2
+
* MetaNetX (MNX) Equation : MNXR94854
* BioCyc : META:3.6.3.2-RXN
+
* KEGG Reaction : R09983
 +
* EC Number : 3.5.1.-
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Magnesium transport via ABC system}}
+
{{#set: common name=3-aminoacrylate hydrolase}}
{{#set: gene associated=EF1352|EF1304}}
+
{{#set: gene associated=EF1028}}
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction source=this was a reaction occurring in the perisplasm of e. coli}}
+
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 18:42, 18 March 2018

Reaction 3AMACHYD

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-aminoacrylate hydrolase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 3-Aminoacrylate[c] + 1.0 H2O H2O[c] + 1.0 H+[c] => 1.0 Malonate semialdehyde[c] + 1.0 Ammonium[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:RXN0-6452
  • MetaNetX (MNX) Equation : MNXR94854
  • KEGG Reaction : R09983
  • EC Number : 3.5.1.-