Difference between revisions of "TMDK2"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/MCOATA MCOATA] == * direction: ** REVERSIBLE * common name: ** Malonyl-CoA-ACP transacylase * Synon...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TMDK2 TMDK2] == * direction: ** LEFT-TO-RIGHT * common name: ** Thymidine kinase GTPThymidine * Sy...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/MCOATA MCOATA] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/TMDK2 TMDK2] ==
 
* direction:
 
* direction:
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Malonyl-CoA-ACP transacylase
+
** Thymidine kinase GTPThymidine
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[malcoa]][c] '''+''' 1.0 [[ACP]][c] '''<=>''' 1.0 [[coa]][c] '''+''' 1.0 [[malACP]][c]
+
** 1.0 [[gtp]][c] '''+''' 1.0 [[thymd]][c] '''=>''' 1.0 [[dtmp]][c] '''+''' 1.0 [[gdp]][c] '''+''' 1.0 [[h]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 Malonyl CoA C24H33N7O19P3S[c] '''+''' 1.0 Acyl carrier protein[c] '''<=>''' 1.0 Coenzyme A[c] '''+''' 1.0 Malonyl-[acyl-carrier protein][c]
+
** 1.0 GTP C10H12N5O14P3[c] '''+''' 1.0 Thymidine C10H14N2O5[c] '''=>''' 1.0 DTMP C10H13N2O8P[c] '''+''' 1.0 GDP C10H12N5O11P2[c] '''+''' 1.0 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF2882]]
+
* [[EF2555]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
* [[EF3111]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
 
== Pathways  ==
 
== Pathways  ==
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
* [[map01212]]: [http://www.genome.jp/dbget-bin/www_bget?map01212 map01212]
 
** '''36''' reactions found over '''182''' reactions in the full pathway
 
* [[map00061]]: [http://www.genome.jp/dbget-bin/www_bget?map00061 map00061]
 
** '''65''' reactions found over '''160''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[orthology]]
** [[pantograph]]:
+
** Source: [[orthology-l_plantarum_wcfs1]]
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
*** [[l_plantarum_wcfs1]]
+
 
== External links  ==
 
== External links  ==
* BioCyc : META:MALONYL-COA-ACP-TRANSACYL-RXN
+
{{#set: direction=LEFT-TO-RIGHT}}
* MetaNetX (MNX) Equation : MNXR101421
+
{{#set: common name=Thymidine kinase GTPThymidine }}
* KEGG Reaction : R01626
+
{{#set: gene associated=EF2555}}
* EC Number : 2.3.1.-
+
{{#set: in pathway=}}
{{#set: direction=REVERSIBLE}}
+
{{#set: common name=Malonyl-CoA-ACP transacylase}}
+
{{#set: gene associated=EF2882|EF3111}}
+
{{#set: in pathway=map01100|map01212|map00061}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-l_plantarum_wcfs1}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1}}
 

Revision as of 19:43, 18 March 2018

Reaction TMDK2

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Thymidine kinase GTPThymidine
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 GTP C10H12N5O14P3[c] + 1.0 Thymidine C10H14N2O5[c] => 1.0 DTMP C10H13N2O8P[c] + 1.0 GDP C10H12N5O11P2[c] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links