Difference between revisions of "APH181"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/FABM2_cust FABM2_cust] == * direction: ** REVERSIBLE * Synonym(s): == Reaction Formula == * With i...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NTD3 NTD3] == * direction: ** LEFT-TO-RIGHT * common name: ** 5'-nucleotidase (dCMP) * Synonym(s):...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/FABM2_cust FABM2_cust] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/NTD3 NTD3] ==
 
* direction:
 
* direction:
** REVERSIBLE
+
** LEFT-TO-RIGHT
 +
* common name:
 +
** 5'-nucleotidase (dCMP)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[toctd2eACP]][c] '''<=>''' 1.0 [[octeACP]][c]
+
** 1.0 [[dcmp]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[pi]][c] '''+''' 1.0 [[dcyt]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 Trans-octadec-2-enoyl-[acyl-carrier protein][c] '''<=>''' 1.0 Cis-octadec-11-enoyl-[acyl-carrier protein] (n-C18:1)[c]
+
** 1.0 DCMP C9H12N3O7P[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 Phosphate[c] '''+''' 1.0 Deoxycytidine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[EF0062]]
 +
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 +
** '''82''' reactions found over '''244''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[manual]]:
+
* Category: [[orthology]]
** [[reaction added for biomass, from model l.plantarum]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
{{#set: direction=REVERSIBLE}}
+
* RHEA:
{{#set: in pathway=}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29363 29363]
{{#set: reconstruction category=manual}}
+
* BioCyc : META:RXN0-5292
{{#set: reconstruction source=reaction added for biomass, from model l.plantarum}}
+
* MetaNetX (MNX) Equation : MNXR102033
 +
* KEGG Reaction : R01664
 +
* EC Number : 3.1.3.5
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=5'-nucleotidase (dCMP)}}
 +
{{#set: gene associated=EF0062}}
 +
{{#set: in pathway=map01100|map00240}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 19:44, 18 March 2018

Reaction NTD3

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 5'-nucleotidase (dCMP)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 DCMP C9H12N3O7P[c] + 1.0 H2O H2O[c] => 1.0 Phosphate[c] + 1.0 Deoxycytidine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:RXN0-5292
  • MetaNetX (MNX) Equation : MNXR102033
  • KEGG Reaction : R01664
  • EC Number : 3.1.3.5