Difference between revisions of "RNDR3"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PGK PGK] == * direction: ** REVERSIBLE * common name: ** Phosphoglycerate kinase * Synonym(s): ==...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NI2abcpppe NI2abcpppe] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * Wit...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/PGK PGK] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/NI2abcpppe NI2abcpppe] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
−
* common name:
+
−
** Phosphoglycerate kinase
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[atp]][c] '''+''' 1.0 [[3pg]][c] '''<=>''' 1.0 [[13dpg]][c] '''+''' 1.0 [[adp]][c]
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** 1.0 [[h2o]][c] '''+''' 1.0 [[ni2]][c] '''+''' 1.0 [[atp]][c] '''=>''' 1.0 [[ni2]][e] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[adp]][c] '''+''' 1.0 [[pi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 3-Phospho-D-glycerate[c] '''<=>''' 1.0 3-Phospho-D-glyceroyl phosphate[c] '''+''' 1.0 ADP C10H12N5O10P2[c]
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** 1.0 H2O H2O[c] '''+''' 1.0 Nickel[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''=>''' 1.0 Nickel[e] '''+''' 1.0 H+[c] '''+''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 Phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF1963]]
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* [[EF1400]]
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** [[pantograph]]-[[l_plantarum_wcfs1]]
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** 1_new_rxn_for_biomass
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
−
** '''179''' reactions found over '''1054''' reactions in the full pathway
 
−
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 
−
** '''104''' reactions found over '''715''' reactions in the full pathway
 
−
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
 
−
** '''45''' reactions found over '''220''' reactions in the full pathway
 
−
* [[map00710]]: [http://www.genome.jp/dbget-bin/www_bget?map00710 map00710]
 
−
** '''16''' reactions found over '''71''' reactions in the full pathway
 
−
* [[map00010]]: [http://www.genome.jp/dbget-bin/www_bget?map00010 map00010]
 
−
** '''24''' reactions found over '''149''' reactions in the full pathway
 
−
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 
−
** '''56''' reactions found over '''228''' reactions in the full pathway
 
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
−
** '''135''' reactions found over '''694''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[manual]]
−
** [[pantograph]]:
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** Source: [[manual-1_new_rxn_for_biomass]]
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*** [[e_coli_sstr_k12_substr_mg1655]]
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*** Comment: [[this was a reaction occurring in the perisplasm of e. coli]]
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*** [[l_plantarum_wcfs1]]
+
 
== External links  ==
 
== External links  ==
−
* EC Number : 2.7.2.3
+
{{#set: direction=LEFT-TO-RIGHT}}
−
* BioCyc : META:PHOSGLYPHOS-RXN
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{{#set: gene associated=EF1400}}
−
* MetaNetX (MNX) Equation : MNXR102538
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{{#set: in pathway=}}
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* RHEA:
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{{#set: reconstruction category=manual}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14801 14801]
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{{#set: reconstruction source=manual-1_new_rxn_for_biomass}}
−
* Reactome : REACT_R-ATH-70486
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{{#set: reconstruction comment=this was a reaction occurring in the perisplasm of e. coli}}
−
* KEGG Reaction : R01512
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=Phosphoglycerate kinase}}
+
−
{{#set: gene associated=EF1963}}
+
−
{{#set: in pathway=map01100|map01110|map01120|map01200|map00710|map00010|map01230|map01130}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1}}
+

Revision as of 19:45, 18 March 2018

Reaction NI2abcpppe

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H2O H2O[c] + 1.0 Nickel[c] + 1.0 ATP C10H12N5O13P3[c] => 1.0 Nickel[e] + 1.0 H+[c] + 1.0 ADP C10H12N5O10P2[c] + 1.0 Phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

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