Difference between revisions of "SERD D"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/3OAR120 3OAR120] == * direction: ** REVERSIBLE * common name: ** 3-oxoacyl-[acyl-carrier-protein] r...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/2S6HCCi 2S6HCCi] == * direction: ** REVERSIBLE * common name: ** 2 succinyl 6 hydroxy 2 4 cyclohexa...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/3OAR120 3OAR120] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/2S6HCCi 2S6HCCi] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 
* common name:
 
* common name:
** 3-oxoacyl-[acyl-carrier-protein] reductase (n-C12:0)
+
** 2 succinyl 6 hydroxy 2 4 cyclohexadiene 1 carboxylate synthase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[nadph]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[3oddecACP]][c] '''<=>''' 1.0 [[nadp]][c] '''+''' 1.0 [[3hddecACP]][c]
+
** 1.0 [[akg]][c] '''+''' 1.0 [[ichor]][c] '''+''' 1.0 [[h]][c] '''<=>''' 1.0 [[co2]][c] '''+''' 1.0 [[pyr]][c] '''+''' 1.0 [[2shchc]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] '''+''' 1.0 H+[c] '''+''' 1.0 3-Oxododecanoyl-[acyl-carrier protein][c] '''<=>''' 1.0 Nicotinamide adenine dinucleotide phosphate[c] '''+''' 1.0 (R)-3-Hydroxydodecanoyl-[acyl-carrier protein][c]
+
** 1.0 2-Oxoglutarate[c] '''+''' 1.0 Isochorismate[c] '''+''' 1.0 H+[c] '''<=>''' 1.0 CO2 CO2[c] '''+''' 1.0 Pyruvate[c] '''+''' 1.0 2-Succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF2881]]
+
* [[EF0448]]
** [[pantograph]]-[[l_plantarum_wcfs1]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
 
== Pathways  ==
 
== Pathways  ==
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
* [[map01212]]: [http://www.genome.jp/dbget-bin/www_bget?map01212 map01212]
 
** '''36''' reactions found over '''182''' reactions in the full pathway
 
* [[map00061]]: [http://www.genome.jp/dbget-bin/www_bget?map00061 map00061]
 
** '''65''' reactions found over '''160''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[orthology]]
** [[pantograph]]:
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
*** [[l_plantarum_wcfs1]]
+
 
== External links  ==
 
== External links  ==
* MetaNetX (MNX) Equation : MNXR94942
+
* MetaNetX (MNX) Equation : MNXR94830
* KEGG Reaction : R04964
+
* EC Number : 2.2.1.9
* EC Number : 1.1.1.100
+
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
{{#set: common name=3-oxoacyl-[acyl-carrier-protein] reductase (n-C12:0)}}
+
{{#set: common name=2 succinyl 6 hydroxy 2 4 cyclohexadiene 1 carboxylate synthase}}
{{#set: gene associated=EF2881}}
+
{{#set: gene associated=EF0448}}
{{#set: in pathway=map01100|map01212|map00061}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1}}
 

Revision as of 19:46, 18 March 2018

Reaction 2S6HCCi

  • direction:
    • REVERSIBLE
  • common name:
    • 2 succinyl 6 hydroxy 2 4 cyclohexadiene 1 carboxylate synthase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 2-Oxoglutarate[c] + 1.0 Isochorismate[c] + 1.0 H+[c] <=> 1.0 CO2 CO2[c] + 1.0 Pyruvate[c] + 1.0 2-Succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR94830
  • EC Number : 2.2.1.9