Difference between revisions of "IPPS"
From metabolic_network
(Created page with "Category:Gene == Gene EF3134 == * Synonym(s): == Reactions associated == * EDA ** pantograph-e_coli_sstr_k12_substr_mg1655 * OAADC ** pantograph-e_c...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/IPPS IPPS] == * direction: ** LEFT-TO-RIGHT * common name: ** 2-isopropylmalate synthase * Synonym(...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/IPPS IPPS] == |
| + | * direction: | ||
| + | ** LEFT-TO-RIGHT | ||
| + | * common name: | ||
| + | ** 2-isopropylmalate synthase | ||
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | ** [[ | + | ** 1.0 [[accoa]][c] '''+''' 1.0 [[3mob]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[3c3hmp]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[coa]][c] |
| − | * [[ | + | * With common name(s): |
| − | ** [[ | + | ** 1.0 Acetyl-CoA[c] '''+''' 1.0 3-Methyl-2-oxobutanoate[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 3-Carboxy-3-hydroxy-4-methylpentanoate[c] '''+''' 1.0 H+[c] '''+''' 1.0 Coenzyme A[c] |
| − | == Pathways | + | |
| − | * [[map01100]] | + | == Genes associated with this reaction == |
| − | * [[ | + | Genes have been associated with this reaction based on different elements listed below. |
| − | * [[ | + | * Gene: [[EF3317]] |
| − | * [[map00620]] | + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] |
| − | * [[ | + | == Pathways == |
| − | * [[ | + | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] |
| + | ** '''460''' reactions found over '''2349''' reactions in the full pathway | ||
| + | * [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110] | ||
| + | ** '''179''' reactions found over '''1054''' reactions in the full pathway | ||
| + | * [[map00290]]: [http://www.genome.jp/dbget-bin/www_bget?map00290 map00290] | ||
| + | ** '''9''' reactions found over '''49''' reactions in the full pathway | ||
| + | * [[map01210]]: [http://www.genome.jp/dbget-bin/www_bget?map01210 map01210] | ||
| + | ** '''14''' reactions found over '''80''' reactions in the full pathway | ||
| + | * [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230] | ||
| + | ** '''56''' reactions found over '''228''' reactions in the full pathway | ||
| + | * [[map00620]]: [http://www.genome.jp/dbget-bin/www_bget?map00620 map00620] | ||
| + | ** '''31''' reactions found over '''163''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] | ||
| + | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | * RHEA: |
| − | {{#set: pathway | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21524 21524] |
| + | * BioCyc : META:2-ISOPROPYLMALATESYN-RXN | ||
| + | * MetaNetX (MNX) Equation : MNXR100879 | ||
| + | * KEGG Reaction : R01213 | ||
| + | * EC Number : 2.3.3.13 | ||
| + | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: common name=2-isopropylmalate synthase}} | ||
| + | {{#set: gene associated=EF3317}} | ||
| + | {{#set: in pathway=map01100|map01110|map00290|map01210|map01230|map00620}} | ||
| + | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168}} | ||
| + | {{#set: reconstruction tool=pantograph}} | ||
Latest revision as of 16:06, 21 March 2018
Contents
Reaction IPPS
- direction:
- LEFT-TO-RIGHT
- common name:
- 2-isopropylmalate synthase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 Acetyl-CoA[c] + 1.0 3-Methyl-2-oxobutanoate[c] + 1.0 H2O H2O[c] => 1.0 3-Carboxy-3-hydroxy-4-methylpentanoate[c] + 1.0 H+[c] + 1.0 Coenzyme A[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: EF3317
Pathways
- map01100: map01100
- 460 reactions found over 2349 reactions in the full pathway
- map01110: map01110
- 179 reactions found over 1054 reactions in the full pathway
- map00290: map00290
- 9 reactions found over 49 reactions in the full pathway
- map01210: map01210
- 14 reactions found over 80 reactions in the full pathway
- map01230: map01230
- 56 reactions found over 228 reactions in the full pathway
- map00620: map00620
- 31 reactions found over 163 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-b_subtilis_subsp_subtilis_str168
- Tool: pantograph
- Source: orthology-b_subtilis_subsp_subtilis_str168
External links
- RHEA:
- BioCyc : META:2-ISOPROPYLMALATESYN-RXN
- MetaNetX (MNX) Equation : MNXR100879
- KEGG Reaction : R01213
- EC Number : 2.3.3.13
