Difference between revisions of "ALAR"

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(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00790 map00790] == * common_name: ** Folate biosynthesis * Synonym(s): == Reaction(s) found == * '...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ALAR ALAR] == * direction: ** REVERSIBLE * common name: ** Alanine racemase * Synonym(s): == React...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00790 map00790] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/ALAR ALAR] ==
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* common_name:
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* direction:
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** Folate biosynthesis
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** REVERSIBLE
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* common name:
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** Alanine racemase
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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* '''12''' reaction(s) found
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* With identifiers:
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** [[DHPS2]]
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** 1.0 [[ala__L]][c] '''<=>''' 1.0 [[ala__D]][c]
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** [[DHNPA2r]]
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* With common name(s):
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** [[DNTPPA_1]]
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** 1.0 L-Alanine[c] '''<=>''' 1.0 D-Alanine[c]
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** [[DHFR]]
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** [[DHFS]]
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== Genes associated with this reaction  ==
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** [[GTPCI]]
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Genes have been associated with this reaction based on different elements listed below.
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** [[AKP1]]
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* Gene: [[EF0849]]
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** [[HPPK2]]
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** Source: [[orthology-l_plantarum_wcfs1]]
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** [[CPMPS]]
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
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** [[DHPTDNR]]
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** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
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** [[THFGLUS]]
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== Pathways  ==
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** [[DHPTDNRN]]
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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== Reaction(s) not found ==
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** '''460''' reactions found over '''2349''' reactions in the full pathway
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* '''29''' reaction(s) not found
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* [[map00473]]: [http://www.genome.jp/dbget-bin/www_bget?map00473 map00473]
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** [http://bigg.ucsd.edu/universal/reactions/FPGS_tm FPGS_tm]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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** [http://bigg.ucsd.edu/universal/reactions/THFOR1 THFOR1]
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== Reconstruction information  ==
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** [http://bigg.ucsd.edu/universal/reactions/THFOR2 THFOR2]
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* Category: [[orthology]]
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** [http://bigg.ucsd.edu/universal/reactions/10FTHFGLULL 10FTHFGLULL]
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
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** [http://bigg.ucsd.edu/universal/reactions/GTPCI_2 GTPCI_2]
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*** Tool: [[pantograph]]
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** [http://bigg.ucsd.edu/universal/reactions/H4MPTGL_atp H4MPTGL_atp]
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** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
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** [http://bigg.ucsd.edu/universal/reactions/THFGLUS_1 THFGLUS_1]
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*** Tool: [[pantograph]]
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** [http://bigg.ucsd.edu/universal/reactions/AKP1_1 AKP1_1]
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** Source: [[orthology-l_plantarum_wcfs1]]
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** [http://bigg.ucsd.edu/universal/reactions/PTHPSn PTHPSn]
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*** Tool: [[pantograph]]
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** [http://bigg.ucsd.edu/universal/reactions/DHFS_1 DHFS_1]
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** [http://bigg.ucsd.edu/universal/reactions/DNTPPA DNTPPA]
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** [http://bigg.ucsd.edu/universal/reactions/DHFOR DHFOR]
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** [http://bigg.ucsd.edu/universal/reactions/10FTHFGLULLm 10FTHFGLULLm]
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** [http://bigg.ucsd.edu/universal/reactions/SPR SPR]
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** [http://bigg.ucsd.edu/universal/reactions/DHFR2i DHFR2i]
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** [http://bigg.ucsd.edu/universal/reactions/GTPCI_1 GTPCI_1]
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** [http://bigg.ucsd.edu/universal/reactions/DHPR DHPR]
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** [http://bigg.ucsd.edu/universal/reactions/ADCL ADCL]
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** [http://bigg.ucsd.edu/universal/reactions/DHFRim DHFRim]
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** [http://bigg.ucsd.edu/universal/reactions/DNMPPA DNMPPA]
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** [http://bigg.ucsd.edu/universal/reactions/SPRn SPRn]
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** [http://bigg.ucsd.edu/universal/reactions/ADCS ADCS]
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−
** [http://bigg.ucsd.edu/universal/reactions/GTPCIn GTPCIn]
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−
** [http://bigg.ucsd.edu/universal/reactions/CPH4S CPH4S]
+
−
** [http://bigg.ucsd.edu/universal/reactions/PTHPS PTHPS]
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−
** [http://bigg.ucsd.edu/universal/reactions/DHPS2_1 DHPS2_1]
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−
** [http://bigg.ucsd.edu/universal/reactions/CDGR CDGR]
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−
** [http://bigg.ucsd.edu/universal/reactions/FOLR2_1 FOLR2_1]
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−
** [http://bigg.ucsd.edu/universal/reactions/FOLR2 FOLR2]
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== External links  ==
 
== External links  ==
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{{#set: common_name=Folate biosynthesis}}
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* RHEA:
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{{#set: reaction found=12}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20249 20249]
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{{#set: reaction not found=29}}
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* BioCyc : META:ALARACECAT-RXN
 +
* MetaNetX (MNX) Equation : MNXR95693
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* KEGG Reaction : R00401
 +
* EC Number : 5.1.1.1
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Alanine racemase}}
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{{#set: gene associated=EF0849}}
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{{#set: in pathway=map01100|map00473}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:06, 21 March 2018

Reaction ALAR

  • direction:
    • REVERSIBLE
  • common name:
    • Alanine racemase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 L-Alanine[c] <=> 1.0 D-Alanine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:ALARACECAT-RXN
  • MetaNetX (MNX) Equation : MNXR95693
  • KEGG Reaction : R00401
  • EC Number : 5.1.1.1




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