Difference between revisions of "ORPT"

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(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240] == * common_name: ** Pyrimidine metabolism * Synonym(s): == Reaction(s) found == *...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ORPT ORPT] == * direction: ** REVERSIBLE * common name: ** Orotate phosphoribosyltransferase * Syno...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/ORPT ORPT] ==
−
* common_name:
+
* direction:
−
** Pyrimidine metabolism
+
** REVERSIBLE
 +
* common name:
 +
** Orotate phosphoribosyltransferase
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
* '''82''' reaction(s) found
+
* With identifiers:
−
** [[CSND]]
+
** 1.0 [[orot5p]][c] '''+''' 1.0 [[ppi]][c] '''<=>''' 1.0 [[orot]][c] '''+''' 1.0 [[prpp]][c]
−
** [[CYTK1]]
+
* With common name(s):
−
** [[CYTK2]]
+
** 1.0 Orotidine 5'-phosphate[c] '''+''' 1.0 Diphosphate[c] '''<=>''' 1.0 Orotate C5H3N2O4[c] '''+''' 1.0 5-Phospho-alpha-D-ribose 1-diphosphate[c]
−
** [[INSH]]
+
 
−
** [[NTD8]]
+
== Genes associated with this reaction  ==
−
** [[URIK1]]
+
Genes have been associated with this reaction based on different elements listed below.
−
** [[URIK3]]
+
* Gene: [[EF1712]]
−
** [[NTP5]]
+
** Source: [[orthology-l_plantarum_wcfs1]]
−
** [[DURIK1]]
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
** [[NTD10]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
−
** [[PUNP2]]
+
== Pathways  ==
−
** [[ITCY]]
+
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** [[DCYTD]]
+
** '''460''' reactions found over '''2349''' reactions in the full pathway
−
** [[DHORTS]]
+
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
−
** [[URACPAH]]
+
** '''82''' reactions found over '''244''' reactions in the full pathway
−
** [[GNNUC]]
+
* [[map00983]]: [http://www.genome.jp/dbget-bin/www_bget?map00983 map00983]
−
** [[RNTR2]]
+
** '''22''' reactions found over '''72''' reactions in the full pathway
−
** [[CTPS2]]
+
== Reconstruction information  ==
−
** [[CTPS1]]
+
* Category: [[orthology]]
−
** [[URIH]]
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
** [[CYTD]]
+
*** Tool: [[pantograph]]
−
** [[UMPK]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
−
** [[RNTR1]]
+
*** Tool: [[pantograph]]
−
** [[NDPK8]]
+
** Source: [[orthology-l_plantarum_wcfs1]]
−
** [[NDPK9]]
+
*** Tool: [[pantograph]]
−
** [[NADDP]]
+
−
** [[CYTDH]]
+
−
** [[NDPK2]]
+
−
** [[NDPK3]]
+
−
** [[DCMPDA]]
+
−
** [[NDPK6]]
+
−
** [[NDPK7]]
+
−
** [[NDPK4]]
+
−
** [[NDPK5]]
+
−
** [[RNTR3]]
+
−
** [[MSAR]]
+
−
** [[RNTR4]]
+
−
** [[CBPS]]
+
−
** [[RNDR1]]
+
−
** [[MCSNAH]]
+
−
** [[NTD9]]
+
−
** [[NTD6]]
+
−
** [[NTD7]]
+
−
** [[ADNUC]]
+
−
** [[NTD5]]
+
−
** [[NTD2]]
+
−
** [[NTD3]]
+
−
** [[NTD1]]
+
−
** [[TMDS]]
+
−
** [[DTMPK]]
+
−
** [[DURIPP]]
+
−
** [[ORPT]]
+
−
** [[NTP10]]
+
−
** [[PUNP1]]
+
−
** [[OMPDC]]
+
−
** [[TMDK1]]
+
−
** [[PYNP2r]]
+
−
** [[GLUN]]
+
−
** [[NDPK1]]
+
−
** [[PYNP1]]
+
−
** [[URIDK2r]]
+
−
** [[UPPRT]]
+
−
** [[PUNP4]]
+
−
** [[NTPP3]]
+
−
** [[PUNP6]]
+
−
** [[PUNP7]]
+
−
** [[DHORD_NAD]]
+
−
** [[CYTDK2]]
+
−
** [[CYTDK1]]
+
−
** [[NTD4]]
+
−
** [[RNDR4]]
+
−
** [[RNDR3]]
+
−
** [[RNDR2]]
+
−
** [[NTPP9]]
+
−
** [[PNP]]
+
−
** [[ASPCT]]
+
−
** [[URIK2]]
+
−
** [[ADNK1]]
+
−
** [[NTPP4]]
+
−
** [[CMPDAi]]
+
−
** [[TMDPP]]
+
−
** [[DUTPDP]]
+
−
== Reaction(s) not found ==
+
−
* '''162''' reaction(s) not found
+
−
** [http://bigg.ucsd.edu/universal/reactions/NDP7g NDP7g]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NTD6l NTD6l]
+
−
** [http://bigg.ucsd.edu/universal/reactions/DUTCP DUTCP]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NTD11 NTD11]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NDPK2m NDPK2m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NDPK2n NDPK2n]
+
−
** [http://bigg.ucsd.edu/universal/reactions/DTTGY DTTGY]
+
−
** [http://bigg.ucsd.edu/universal/reactions/DURIK1m DURIK1m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NTD7pp NTD7pp]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NTD4pp NTD4pp]
+
−
** [http://bigg.ucsd.edu/universal/reactions/DCYTDn DCYTDn]
+
−
** [http://bigg.ucsd.edu/universal/reactions/3NTD4pp 3NTD4pp]
+
−
** [http://bigg.ucsd.edu/universal/reactions/DUTPDPm DUTPDPm]
+
−
** [http://bigg.ucsd.edu/universal/reactions/DUTPDPn DUTPDPn]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NTD1m NTD1m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/DGTUP DGTUP]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ATPH1 ATPH1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/AFLBURPPAAMH AFLBURPPAAMH]
+
−
** [http://bigg.ucsd.edu/universal/reactions/56DH5FLURAAMH 56DH5FLURAAMH]
+
−
** [http://bigg.ucsd.edu/universal/reactions/URIDK2m URIDK2m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NDPK3n NDPK3n]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NDPK3m NDPK3m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NTD9l NTD9l]
+
−
** [http://bigg.ucsd.edu/universal/reactions/DCK1m DCK1m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/DCK1n DCK1n]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NPH NPH]
+
−
** [http://bigg.ucsd.edu/universal/reactions/3NTD2pp 3NTD2pp]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NTD9e NTD9e]
+
−
** [http://bigg.ucsd.edu/universal/reactions/DATCY DATCY]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ASPCTn ASPCTn]
+
−
** [http://bigg.ucsd.edu/universal/reactions/RNDR1n RNDR1n]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NDPK10m NDPK10m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NTPP8 NTPP8]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NTPP6 NTPP6]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NTPP2 NTPP2]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NTP8 NTP8]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NTP9 NTP9]
+
−
** [http://bigg.ucsd.edu/universal/reactions/UTPH1 UTPH1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ATP1ter ATP1ter]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ATPtm ATPtm]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NTD4e NTD4e]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NDPK10 NDPK10]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NDPK8n NDPK8n]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ASPCT_1 ASPCT_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/CYTDn CYTDn]
+
−
** [http://bigg.ucsd.edu/universal/reactions/CMPN CMPN]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NDPK5m NDPK5m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/UMPKn UMPKn]
+
−
** [http://bigg.ucsd.edu/universal/reactions/UMPKm UMPKm]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ATPH2e ATPH2e]
+
−
** [http://bigg.ucsd.edu/universal/reactions/BUPN BUPN]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NP1 NP1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NT5C NT5C]
+
−
** [http://bigg.ucsd.edu/universal/reactions/DCTPD DCTPD]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ATDGDm ATDGDm]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ATPH1e ATPH1e]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NTD11pp NTD11pp]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NDP3 NDP3]
+
−
** [http://bigg.ucsd.edu/universal/reactions/TMDK1m TMDK1m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NDP1 NDP1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NDP6 NDP6]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NDP7 NDP7]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NTD10pp NTD10pp]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NTD7e NTD7e]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NDPK9m NDPK9m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NDPK9n NDPK9n]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NDPK10n NDPK10n]
+
−
** [http://bigg.ucsd.edu/universal/reactions/DUTUP DUTUP]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NTD7l NTD7l]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NDPK1m NDPK1m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NDPK1n NDPK1n]
+
−
** [http://bigg.ucsd.edu/universal/reactions/DHPD DHPD]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ASPCTm ASPCTm]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NADDPp NADDPp]
+
−
** [http://bigg.ucsd.edu/universal/reactions/CYTK1n CYTK1n]
+
−
** [http://bigg.ucsd.edu/universal/reactions/23PDE4pp 23PDE4pp]
+
−
** [http://bigg.ucsd.edu/universal/reactions/CYTK1m CYTK1m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/CDPPH CDPPH]
+
−
** [http://bigg.ucsd.edu/universal/reactions/DPCOAPP DPCOAPP]
+
−
** [http://bigg.ucsd.edu/universal/reactions/UTUP UTUP]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NTD3pp NTD3pp]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NTD8pp NTD8pp]
+
−
** [http://bigg.ucsd.edu/universal/reactions/5FLURAPRT 5FLURAPRT]
+
−
** [http://bigg.ucsd.edu/universal/reactions/DHPM2 DHPM2]
+
−
** [http://bigg.ucsd.edu/universal/reactions/DHPM1 DHPM1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NDPK6m NDPK6m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NDPK6n NDPK6n]
+
−
** [http://bigg.ucsd.edu/universal/reactions/DHORDfum DHORDfum]
+
−
** [http://bigg.ucsd.edu/universal/reactions/FADDP FADDP]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NTD2pp NTD2pp]
+
−
** [http://bigg.ucsd.edu/universal/reactions/GLUNpp GLUNpp]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NTD4l NTD4l]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NMNHYD NMNHYD]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NDP3g NDP3g]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NTD5pp NTD5pp]
+
−
** [http://bigg.ucsd.edu/universal/reactions/GLUNm GLUNm]
+
−
** [http://bigg.ucsd.edu/universal/reactions/3NTD7pp 3NTD7pp]
+
−
** [http://bigg.ucsd.edu/universal/reactions/GTPH1 GTPH1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/DCK2n DCK2n]
+
−
** [http://bigg.ucsd.edu/universal/reactions/DHR DHR]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NTD2m NTD2m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NTD2l NTD2l]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NTD2e NTD2e]
+
−
** [http://bigg.ucsd.edu/universal/reactions/DURAD2 DURAD2]
+
−
** [http://bigg.ucsd.edu/universal/reactions/DURAD DURAD]
+
−
** [http://bigg.ucsd.edu/universal/reactions/RNDR4n RNDR4n]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NDPK7n NDPK7n]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NDPK7m NDPK7m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NTD5l NTD5l]
+
−
** [http://bigg.ucsd.edu/universal/reactions/URIDK2rn URIDK2rn]
+
−
** [http://bigg.ucsd.edu/universal/reactions/CBPSam CBPSam]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NTD6pp NTD6pp]
+
−
** [http://bigg.ucsd.edu/universal/reactions/DCTPD2 DCTPD2]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NADDPe NADDPe]
+
−
** [http://bigg.ucsd.edu/universal/reactions/RNDR2n RNDR2n]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NDPK8m NDPK8m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ADNK1m ADNK1m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HCGALm HCGALm]
+
−
** [http://bigg.ucsd.edu/universal/reactions/3NTD7l 3NTD7l]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NTP7 NTP7]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NTD5m NTD5m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NMNR NMNR]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NDP8ex NDP8ex]
+
−
** [http://bigg.ucsd.edu/universal/reactions/CYTK2n CYTK2n]
+
−
** [http://bigg.ucsd.edu/universal/reactions/DURADx DURADx]
+
−
** [http://bigg.ucsd.edu/universal/reactions/23PDE9pp 23PDE9pp]
+
−
** [http://bigg.ucsd.edu/universal/reactions/DTPH DTPH]
+
−
** [http://bigg.ucsd.edu/universal/reactions/23PDE7pp 23PDE7pp]
+
−
** [http://bigg.ucsd.edu/universal/reactions/DTTUP DTTUP]
+
−
** [http://bigg.ucsd.edu/universal/reactions/DGNSKm DGNSKm]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NDPK4n NDPK4n]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NDPK4m NDPK4m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/3NTD9pp 3NTD9pp]
+
−
** [http://bigg.ucsd.edu/universal/reactions/UPPN UPPN]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NTD1pp NTD1pp]
+
−
** [http://bigg.ucsd.edu/universal/reactions/UTCY UTCY]
+
−
** [http://bigg.ucsd.edu/universal/reactions/CBPSn CBPSn]
+
−
** [http://bigg.ucsd.edu/universal/reactions/DCTCP DCTCP]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ATGDm ATGDm]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NTD8l NTD8l]
+
−
** [http://bigg.ucsd.edu/universal/reactions/23PDE2pp 23PDE2pp]
+
−
** [http://bigg.ucsd.edu/universal/reactions/GAM GAM]
+
−
** [http://bigg.ucsd.edu/universal/reactions/DNADDP DNADDP]
+
−
** [http://bigg.ucsd.edu/universal/reactions/TMDS3 TMDS3]
+
−
** [http://bigg.ucsd.edu/universal/reactions/UDPGP UDPGP]
+
−
** [http://bigg.ucsd.edu/universal/reactions/DGTCY DGTCY]
+
−
** [http://bigg.ucsd.edu/universal/reactions/UDPGPpp UDPGPpp]
+
−
** [http://bigg.ucsd.edu/universal/reactions/GMP5N GMP5N]
+
−
** [http://bigg.ucsd.edu/universal/reactions/DHORTSn DHORTSn]
+
−
** [http://bigg.ucsd.edu/universal/reactions/5FLURAOR 5FLURAOR]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NDPK5n NDPK5n]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NDP3ex NDP3ex]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NDP7ex NDP7ex]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NTD9pp NTD9pp]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NDP7er NDP7er]
+
−
** [http://bigg.ucsd.edu/universal/reactions/TMDSf TMDSf]
+
−
** [http://bigg.ucsd.edu/universal/reactions/CYTDK2m CYTDK2m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/DCTUP DCTUP]
+
−
** [http://bigg.ucsd.edu/universal/reactions/DATUP DATUP]
+
−
** [http://bigg.ucsd.edu/universal/reactions/NTD3l NTD3l]
+
−
** [http://bigg.ucsd.edu/universal/reactions/PUNP1m PUNP1m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/RNDR3n RNDR3n]
+
 
== External links  ==
 
== External links  ==
−
{{#set: common_name=Pyrimidine metabolism}}
+
* EC Number : 2.4.2.10
−
{{#set: reaction found=82}}
+
* BioCyc : META:OROPRIBTRANS-RXN
−
{{#set: reaction not found=162}}
+
* MetaNetX (MNX) Equation : MNXR102231
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10380 10380]
 +
* Reactome : REACT_R-ATH-73567
 +
* KEGG Reaction : R01870
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Orotate phosphoribosyltransferase}}
 +
{{#set: gene associated=EF1712}}
 +
{{#set: in pathway=map01100|map00240|map00983}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:06, 21 March 2018

Reaction ORPT

  • direction:
    • REVERSIBLE
  • common name:
    • Orotate phosphoribosyltransferase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Orotidine 5'-phosphate[c] + 1.0 Diphosphate[c] <=> 1.0 Orotate C5H3N2O4[c] + 1.0 5-Phospho-alpha-D-ribose 1-diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 2.4.2.10
  • BioCyc : META:OROPRIBTRANS-RXN
  • MetaNetX (MNX) Equation : MNXR102231
  • RHEA:
  • Reactome : REACT_R-ATH-73567
  • KEGG Reaction : R01870




Retrieved from "http://gem-aureme.irisa.fr/efaecV583/index.php?title=ORPT&oldid=8573"