Difference between revisions of "NTD10"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NTD10 NTD10] == * direction: ** LEFT-TO-RIGHT * common name: ** 5'-nucleotidase (XMP) * Synonym(s):...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00220 map00220] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/NTD10 NTD10] ==
−
* common_name:
+
* direction:
−
** Arginine biosynthesis
+
** LEFT-TO-RIGHT
 +
* common name:
 +
** 5'-nucleotidase (XMP)
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''9''' reactions found over '''65''' reactions in the full pathway
+
* With identifiers:
−
* [[ACGS]]
+
** 1.0 [[xmp]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[pi]][c] '''+''' 1.0 [[xtsn]][c]
−
* [[ALATA_L]]
+
* With common name(s):
−
* [[ASNN]]
+
** 1.0 Xanthosine 5'-phosphate[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 Phosphate[c] '''+''' 1.0 Xanthosine[c]
−
* [[ASPTA]]
+
 
−
* [[CBMKr]]
+
== Genes associated with this reaction  ==
−
* [[GLNS]]
+
Genes have been associated with this reaction based on different elements listed below.
−
* [[GLUDxi]]
+
* Gene: [[EF0062]]
−
* [[GLUDy]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
−
* [[OCBT]]
+
== Pathways  ==
−
== Reaction(s) not found ==
+
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
−
* [http://bigg.ucsd.edu/universal/reactions/3SALATAi 3SALATAi]
+
** '''82''' reactions found over '''244''' reactions in the full pathway
−
* [http://bigg.ucsd.edu/universal/reactions/3SALATAim 3SALATAim]
+
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
* [http://bigg.ucsd.edu/universal/reactions/AATC AATC]
+
** '''460''' reactions found over '''2349''' reactions in the full pathway
−
* [http://bigg.ucsd.edu/universal/reactions/AATG AATG]
+
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
−
* [http://bigg.ucsd.edu/universal/reactions/AATGm AATGm]
+
** '''179''' reactions found over '''1054''' reactions in the full pathway
−
* [http://bigg.ucsd.edu/universal/reactions/ACGK ACGK]
+
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
−
* [http://bigg.ucsd.edu/universal/reactions/ACGKm ACGKm]
+
** '''97''' reactions found over '''298''' reactions in the full pathway
−
* [http://bigg.ucsd.edu/universal/reactions/ACGSm ACGSm]
+
* [[map00760]]: [http://www.genome.jp/dbget-bin/www_bget?map00760 map00760]
−
* [http://bigg.ucsd.edu/universal/reactions/ACODA ACODA]
+
** '''19''' reactions found over '''97''' reactions in the full pathway
−
* [http://bigg.ucsd.edu/universal/reactions/ACOTA ACOTA]
+
== Reconstruction information  ==
−
* [http://bigg.ucsd.edu/universal/reactions/ACOTAim ACOTAim]
+
* Category: [[orthology]]
−
* [http://bigg.ucsd.edu/universal/reactions/AGPR AGPR]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
−
* [http://bigg.ucsd.edu/universal/reactions/AGPRim AGPRim]
+
*** Tool: [[pantograph]]
−
* [http://bigg.ucsd.edu/universal/reactions/ALATA_Lm ALATA_Lm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ALPHNH ALPHNH]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ALPHm ALPHm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ARGDI ARGDI]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ARGDr ARGDr]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ARGN ARGN]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ARGNm ARGNm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ARGSL ARGSL]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ARGSS ARGSS]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ARGSS_1 ARGSS_1]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ASNNe ASNNe]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ASNNm ASNNm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ASNNpp ASNNpp]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ASPATh ASPATh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ASPSE ASPSE]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ASPTAm ASPTAm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ASPTAp ASPTAp]
+
−
* [http://bigg.ucsd.edu/universal/reactions/CPS CPS]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GALh GALh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GALm GALm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GDH GDH]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GDH1 GDH1]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GDH_nadp GDH_nadp]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GLNSP1 GLNSP1]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GLNSP2 GLNSP2]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GLNSP3 GLNSP3]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GLUDym GLUDym]
+
−
* [http://bigg.ucsd.edu/universal/reactions/LCYSTAT LCYSTAT]
+
−
* [http://bigg.ucsd.edu/universal/reactions/LCYSTATm LCYSTATm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/NOS NOS]
+
−
* [http://bigg.ucsd.edu/universal/reactions/NOS1 NOS1]
+
−
* [http://bigg.ucsd.edu/universal/reactions/NOS2 NOS2]
+
−
* [http://bigg.ucsd.edu/universal/reactions/NOS2_1 NOS2_1]
+
−
* [http://bigg.ucsd.edu/universal/reactions/OCBTm OCBTm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/OCT OCT]
+
−
* [http://bigg.ucsd.edu/universal/reactions/OCTh OCTh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/OCTm OCTm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ORNTAC ORNTAC]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ORNTACim ORNTACim]
+
−
* [http://bigg.ucsd.edu/universal/reactions/URCB URCB]
+
−
* [http://bigg.ucsd.edu/universal/reactions/URCBm URCBm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/UREA UREA]
+
−
* [http://bigg.ucsd.edu/universal/reactions/UREASE UREASE]
+
 
== External links  ==
 
== External links  ==
−
{{#set: common_name=Arginine biosynthesis}}
+
* RHEA:
−
{{#set: reaction found=9}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28530 28530]
−
{{#set: reaction not found=65}}
+
* BioCyc : META:XMPXAN-RXN
−
{{#set: completion rate=14.0}}
+
* MetaNetX (MNX) Equation : MNXR102029
 +
* KEGG Reaction : R02719
 +
* EC Number : 3.1.3.5
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=5'-nucleotidase (XMP)}}
 +
{{#set: gene associated=EF0062}}
 +
{{#set: in pathway=map00240|map01100|map01110|map00230|map00760}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:08, 21 March 2018

Reaction NTD10

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 5'-nucleotidase (XMP)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Xanthosine 5'-phosphate[c] + 1.0 H2O H2O[c] => 1.0 Phosphate[c] + 1.0 Xanthosine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:XMPXAN-RXN
  • MetaNetX (MNX) Equation : MNXR102029
  • KEGG Reaction : R02719
  • EC Number : 3.1.3.5




Retrieved from "http://gem-aureme.irisa.fr/efaecV583/index.php?title=NTD10&oldid=8683"