Difference between revisions of "ACODA 1"

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(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00860 map00860] == * common_name: ** Porphyrin and chlorophyll metabolism * Synonym(s): == Reactio...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ACODA_1 ACODA_1] == * direction: ** LEFT-TO-RIGHT * common name: ** Acetylornithine deacetylase * S...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00860 map00860] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/ACODA_1 ACODA_1] ==
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* common_name:
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* direction:
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** Porphyrin and chlorophyll metabolism
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** LEFT-TO-RIGHT
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* common name:
 +
** Acetylornithine deacetylase
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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* '''4''' reaction(s) found
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* With identifiers:
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** [[GLUTRS]]
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** 1.0 [[h2o]][c] '''+''' 1.0 [[acorn]][c] '''=>''' 1.0 [[ac]][c] '''+''' 1.0 [[orn__L]][c]
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** [[APPLDHr]]
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* With common name(s):
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** [[CPPPGO]]
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** 1.0 H2O H2O[c] '''+''' 1.0 N2-Acetyl-L-ornithine[c] '''=>''' 1.0 Acetate[c] '''+''' 1.0 L Ornithine C5H13N2O2[c]
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** [[FCLT]]
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== Reaction(s) not found ==
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== Genes associated with this reaction  ==
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* '''102''' reaction(s) not found
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Genes have been associated with this reaction based on different elements listed below.
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** [http://bigg.ucsd.edu/universal/reactions/POR_1 POR_1]
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* Gene: [[EF3178]]
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** [http://bigg.ucsd.edu/universal/reactions/CBLAT CBLAT]
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** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
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** [http://bigg.ucsd.edu/universal/reactions/ADCPS1 ADCPS1]
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== Pathways  ==
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** [http://bigg.ucsd.edu/universal/reactions/ADOCBIAH ADOCBIAH]
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== Reconstruction information  ==
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** [http://bigg.ucsd.edu/universal/reactions/UPPDC2 UPPDC2]
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* Category: [[orthology]]
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** [http://bigg.ucsd.edu/universal/reactions/ADCPS2 ADCPS2]
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** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
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** [http://bigg.ucsd.edu/universal/reactions/UGT1A4r UGT1A4r]
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*** Tool: [[pantograph]]
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** [http://bigg.ucsd.edu/universal/reactions/PPPGO_1 PPPGO_1]
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** [http://bigg.ucsd.edu/universal/reactions/COCHL COCHL]
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** [http://bigg.ucsd.edu/universal/reactions/GLUTRR GLUTRR]
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** [http://bigg.ucsd.edu/universal/reactions/CYRDAR2 CYRDAR2]
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** [http://bigg.ucsd.edu/universal/reactions/CHLBSP CHLBSP]
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** [http://bigg.ucsd.edu/universal/reactions/MPOMC1 MPOMC1]
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** [http://bigg.ucsd.edu/universal/reactions/NNDMBRT NNDMBRT]
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** [http://bigg.ucsd.edu/universal/reactions/CPC6R CPC6R]
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** [http://bigg.ucsd.edu/universal/reactions/UGT1A7r UGT1A7r]
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** [http://bigg.ucsd.edu/universal/reactions/GLYATx GLYATx]
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** [http://bigg.ucsd.edu/universal/reactions/CPC3MT CPC3MT]
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** [http://bigg.ucsd.edu/universal/reactions/GLYATm GLYATm]
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** [http://bigg.ucsd.edu/universal/reactions/BILIRED BILIRED]
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** [http://bigg.ucsd.edu/universal/reactions/G1SAT_1 G1SAT_1]
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** [http://bigg.ucsd.edu/universal/reactions/UPPDC1 UPPDC1]
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** [http://bigg.ucsd.edu/universal/reactions/CODSCL4MT CODSCL4MT]
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** [http://bigg.ucsd.edu/universal/reactions/FCLT_1 FCLT_1]
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** [http://bigg.ucsd.edu/universal/reactions/ADCYRS ADCYRS]
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** [http://bigg.ucsd.edu/universal/reactions/GLUTRSm GLUTRSm]
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** [http://bigg.ucsd.edu/universal/reactions/GLUTRR_1 GLUTRR_1]
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** [http://bigg.ucsd.edu/universal/reactions/UPP3MT UPP3MT]
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** [http://bigg.ucsd.edu/universal/reactions/MPOMMM MPOMMM]
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** [http://bigg.ucsd.edu/universal/reactions/PC8XM PC8XM]
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** [http://bigg.ucsd.edu/universal/reactions/UGT1A2r UGT1A2r]
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** [http://bigg.ucsd.edu/universal/reactions/CHLASE CHLASE]
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** [http://bigg.ucsd.edu/universal/reactions/CHLASP CHLASP]
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** [http://bigg.ucsd.edu/universal/reactions/CODSCL5BMT CODSCL5BMT]
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** [http://bigg.ucsd.edu/universal/reactions/CBIAT CBIAT]
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** [http://bigg.ucsd.edu/universal/reactions/CBL2OR CBL2OR]
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** [http://bigg.ucsd.edu/universal/reactions/G1SAT G1SAT]
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** [http://bigg.ucsd.edu/universal/reactions/UGT1A5r UGT1A5r]
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** [http://bigg.ucsd.edu/universal/reactions/SHCHF SHCHF]
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** [http://bigg.ucsd.edu/universal/reactions/MPML MPML]
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** [http://bigg.ucsd.edu/universal/reactions/UGT1A3r UGT1A3r]
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** [http://bigg.ucsd.edu/universal/reactions/CBLAT_DELETE CBLAT_DELETE]
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** [http://bigg.ucsd.edu/universal/reactions/UPP3S UPP3S]
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** [http://bigg.ucsd.edu/universal/reactions/CPPPGO_1 CPPPGO_1]
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** [http://bigg.ucsd.edu/universal/reactions/ADOCBLS ADOCBLS]
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** [http://bigg.ucsd.edu/universal/reactions/PPBNGS_1 PPBNGS_1]
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** [http://bigg.ucsd.edu/universal/reactions/CHPHYS CHPHYS]
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** [http://bigg.ucsd.edu/universal/reactions/UPP3S_1 UPP3S_1]
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** [http://bigg.ucsd.edu/universal/reactions/TFENFEOR TFENFEOR]
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** [http://bigg.ucsd.edu/universal/reactions/UGT1A8r UGT1A8r]
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** [http://bigg.ucsd.edu/universal/reactions/PC20M PC20M]
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** [http://bigg.ucsd.edu/universal/reactions/PC17M PC17M]
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** [http://bigg.ucsd.edu/universal/reactions/PPBNGS PPBNGS]
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** [http://bigg.ucsd.edu/universal/reactions/PPPGO3 PPPGO3]
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** [http://bigg.ucsd.edu/universal/reactions/PC6AR PC6AR]
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** [http://bigg.ucsd.edu/universal/reactions/PC6YM PC6YM]
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** [http://bigg.ucsd.edu/universal/reactions/CODSCL5DA CODSCL5DA]
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** [http://bigg.ucsd.edu/universal/reactions/ADOCBIK ADOCBIK]
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** [http://bigg.ucsd.edu/universal/reactions/HEMEOSm_1 HEMEOSm_1]
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** [http://bigg.ucsd.edu/universal/reactions/CPC2MT CPC2MT]
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** [http://bigg.ucsd.edu/universal/reactions/CHLDADMT CHLDADMT]
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** [http://bigg.ucsd.edu/universal/reactions/MPOMT MPOMT]
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** [http://bigg.ucsd.edu/universal/reactions/DVOCHR DVOCHR]
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** [http://bigg.ucsd.edu/universal/reactions/R05219 R05219]
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** [http://bigg.ucsd.edu/universal/reactions/UGT1A10r UGT1A10r]
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** [http://bigg.ucsd.edu/universal/reactions/CYRDAAT CYRDAAT]
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** [http://bigg.ucsd.edu/universal/reactions/GLYAT GLYAT]
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** [http://bigg.ucsd.edu/universal/reactions/HEMEOSm HEMEOSm]
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** [http://bigg.ucsd.edu/universal/reactions/UPP1S UPP1S]
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** [http://bigg.ucsd.edu/universal/reactions/ALASm ALASm]
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** [http://bigg.ucsd.edu/universal/reactions/FEROt FEROt]
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** [http://bigg.ucsd.edu/universal/reactions/PPPGOm PPPGOm]
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** [http://bigg.ucsd.edu/universal/reactions/MPMECY2 MPMECY2]
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** [http://bigg.ucsd.edu/universal/reactions/CPPPGO2 CPPPGO2]
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** [http://bigg.ucsd.edu/universal/reactions/MPML_1 MPML_1]
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** [http://bigg.ucsd.edu/universal/reactions/UPPDC1_1 UPPDC1_1]
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** [http://bigg.ucsd.edu/universal/reactions/DVCHLDR DVCHLDR]
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** [http://bigg.ucsd.edu/universal/reactions/BILIRBU BILIRBU]
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** [http://bigg.ucsd.edu/universal/reactions/ACBIPGT ACBIPGT]
+
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** [http://bigg.ucsd.edu/universal/reactions/CPC8MM CPC8MM]
+
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** [http://bigg.ucsd.edu/universal/reactions/FERO FERO]
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** [http://bigg.ucsd.edu/universal/reactions/PPPGO PPPGO]
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** [http://bigg.ucsd.edu/universal/reactions/PC11M PC11M]
+
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** [http://bigg.ucsd.edu/universal/reactions/UPP3MT_1 UPP3MT_1]
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** [http://bigg.ucsd.edu/universal/reactions/RZ5PP RZ5PP]
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** [http://bigg.ucsd.edu/universal/reactions/HEMEOS HEMEOS]
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** [http://bigg.ucsd.edu/universal/reactions/UGT1A6r UGT1A6r]
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** [http://bigg.ucsd.edu/universal/reactions/BILIRED_1 BILIRED_1]
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** [http://bigg.ucsd.edu/universal/reactions/SHCHF_1 SHCHF_1]
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** [http://bigg.ucsd.edu/universal/reactions/GLUTRS_1 GLUTRS_1]
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** [http://bigg.ucsd.edu/universal/reactions/FEROpp FEROpp]
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** [http://bigg.ucsd.edu/universal/reactions/LTHRK LTHRK]
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** [http://bigg.ucsd.edu/universal/reactions/CPC4MT CPC4MT]
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** [http://bigg.ucsd.edu/universal/reactions/FCLTm FCLTm]
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** [http://bigg.ucsd.edu/universal/reactions/CODSCL8XI CODSCL8XI]
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** [http://bigg.ucsd.edu/universal/reactions/MPOMOR MPOMOR]
+
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** [http://bigg.ucsd.edu/universal/reactions/UPPDC2_1 UPPDC2_1]
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** [http://bigg.ucsd.edu/universal/reactions/THRPDC THRPDC]
+
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** [http://bigg.ucsd.edu/universal/reactions/UGT1A1r UGT1A1r]
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** [http://bigg.ucsd.edu/universal/reactions/SHCHD2 SHCHD2]
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** [http://bigg.ucsd.edu/universal/reactions/CHLADMT CHLADMT]
+
−
** [http://bigg.ucsd.edu/universal/reactions/CBLATm CBLATm]
+
 
== External links  ==
 
== External links  ==
−
{{#set: common_name=Porphyrin and chlorophyll metabolism}}
+
* RHEA:
−
{{#set: reaction found=4}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15941 15941]
−
{{#set: reaction not found=102}}
+
* BioCyc : META:ACETYLORNDEACET-RXN
 +
* MetaNetX (MNX) Equation : MNXR95377
 +
* KEGG Reaction : R00669
 +
* EC Number : 3.5.1.14
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Acetylornithine deacetylase}}
 +
{{#set: gene associated=EF3178}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:08, 21 March 2018

Reaction ACODA_1

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Acetylornithine deacetylase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H2O H2O[c] + 1.0 N2-Acetyl-L-ornithine[c] => 1.0 Acetate[c] + 1.0 L Ornithine C5H13N2O2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:ACETYLORNDEACET-RXN
  • MetaNetX (MNX) Equation : MNXR95377
  • KEGG Reaction : R00669
  • EC Number : 3.5.1.14




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